Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
C12orf4Q9NQ89 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
C12orf4Q9NQ89 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.91■■□□□ 1.1
C12orf4Q9NQ89 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
C12orf4Q9NQ89 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.9■■□□□ 1.1
C12orf4Q9NQ89 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.9■■□□□ 1.1
C12orf4Q9NQ89 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
C12orf4Q9NQ89 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
C12orf4Q9NQ89 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
C12orf4Q9NQ89 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.89■■□□□ 1.1
C12orf4Q9NQ89 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.89■■□□□ 1.1
C12orf4Q9NQ89 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
C12orf4Q9NQ89 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
C12orf4Q9NQ89 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
C12orf4Q9NQ89 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
C12orf4Q9NQ89 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
C12orf4Q9NQ89 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
C12orf4Q9NQ89 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
C12orf4Q9NQ89 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
C12orf4Q9NQ89 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.87■■□□□ 1.09
C12orf4Q9NQ89 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
C12orf4Q9NQ89 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.87■■□□□ 1.09
C12orf4Q9NQ89 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.87■■□□□ 1.09
C12orf4Q9NQ89 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
C12orf4Q9NQ89 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
C12orf4Q9NQ89 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.86■■□□□ 1.09
C12orf4Q9NQ89 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
C12orf4Q9NQ89 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
C12orf4Q9NQ89 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
C12orf4Q9NQ89 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
C12orf4Q9NQ89 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
C12orf4Q9NQ89 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
C12orf4Q9NQ89 RARRES2P7-201ENST00000567349 469 ntBASIC21.84■■□□□ 1.09
C12orf4Q9NQ89 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.83■■□□□ 1.09
C12orf4Q9NQ89 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.08
C12orf4Q9NQ89 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
C12orf4Q9NQ89 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C12orf4Q9NQ89 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C12orf4Q9NQ89 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C12orf4Q9NQ89 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C12orf4Q9NQ89 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C12orf4Q9NQ89 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
C12orf4Q9NQ89 SETD8P1-201ENST00000623146 1180 ntBASIC21.8■■□□□ 1.08
C12orf4Q9NQ89 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
C12orf4Q9NQ89 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.79■■□□□ 1.08
C12orf4Q9NQ89 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
C12orf4Q9NQ89 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
C12orf4Q9NQ89 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C12orf4Q9NQ89 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C12orf4Q9NQ89 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C12orf4Q9NQ89 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
C12orf4Q9NQ89 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
C12orf4Q9NQ89 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.78■■□□□ 1.08
C12orf4Q9NQ89 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.78■■□□□ 1.08
C12orf4Q9NQ89 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
C12orf4Q9NQ89 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
C12orf4Q9NQ89 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.77■■□□□ 1.07
C12orf4Q9NQ89 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.76■■□□□ 1.07
C12orf4Q9NQ89 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
C12orf4Q9NQ89 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
C12orf4Q9NQ89 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.76■■□□□ 1.07
C12orf4Q9NQ89 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
C12orf4Q9NQ89 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
C12orf4Q9NQ89 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.75■■□□□ 1.07
C12orf4Q9NQ89 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
C12orf4Q9NQ89 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
C12orf4Q9NQ89 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
C12orf4Q9NQ89 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
C12orf4Q9NQ89 AP004833.2-201ENST00000532228 1454 ntBASIC21.74■■□□□ 1.07
C12orf4Q9NQ89 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
C12orf4Q9NQ89 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.74■■□□□ 1.07
C12orf4Q9NQ89 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
C12orf4Q9NQ89 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
C12orf4Q9NQ89 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
C12orf4Q9NQ89 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
C12orf4Q9NQ89 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
C12orf4Q9NQ89 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
C12orf4Q9NQ89 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
C12orf4Q9NQ89 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.72■■□□□ 1.07
C12orf4Q9NQ89 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
C12orf4Q9NQ89 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
C12orf4Q9NQ89 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
C12orf4Q9NQ89 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
C12orf4Q9NQ89 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C12orf4Q9NQ89 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
C12orf4Q9NQ89 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
C12orf4Q9NQ89 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
C12orf4Q9NQ89 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C12orf4Q9NQ89 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
C12orf4Q9NQ89 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
C12orf4Q9NQ89 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.7■■□□□ 1.06
C12orf4Q9NQ89 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
C12orf4Q9NQ89 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C12orf4Q9NQ89 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C12orf4Q9NQ89 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
C12orf4Q9NQ89 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.69■■□□□ 1.06
C12orf4Q9NQ89 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.69■■□□□ 1.06
C12orf4Q9NQ89 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
C12orf4Q9NQ89 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C12orf4Q9NQ89 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms