Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TM9SF3Q9HD45 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.74■■□□□ 1.71
TM9SF3Q9HD45 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.74■■□□□ 1.71
TM9SF3Q9HD45 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
TM9SF3Q9HD45 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
TM9SF3Q9HD45 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.73■■□□□ 1.71
TM9SF3Q9HD45 RARRES2P2-201ENST00000394842 485 ntBASIC25.73■■□□□ 1.71
TM9SF3Q9HD45 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
TM9SF3Q9HD45 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.73■■□□□ 1.71
TM9SF3Q9HD45 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
TM9SF3Q9HD45 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TM9SF3Q9HD45 GPX1-201ENST00000419349 1106 ntBASIC25.72■■□□□ 1.71
TM9SF3Q9HD45 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TM9SF3Q9HD45 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TM9SF3Q9HD45 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TM9SF3Q9HD45 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TM9SF3Q9HD45 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
TM9SF3Q9HD45 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
TM9SF3Q9HD45 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.71
TM9SF3Q9HD45 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TM9SF3Q9HD45 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TM9SF3Q9HD45 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TM9SF3Q9HD45 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
TM9SF3Q9HD45 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
TM9SF3Q9HD45 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TM9SF3Q9HD45 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
TM9SF3Q9HD45 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
TM9SF3Q9HD45 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.67■■□□□ 1.7
TM9SF3Q9HD45 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
TM9SF3Q9HD45 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TM9SF3Q9HD45 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
TM9SF3Q9HD45 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.66■■□□□ 1.7
TM9SF3Q9HD45 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
TM9SF3Q9HD45 AC127502.1-201ENST00000399971 1502 ntBASIC25.66■■□□□ 1.7
TM9SF3Q9HD45 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.65■■□□□ 1.7
TM9SF3Q9HD45 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TM9SF3Q9HD45 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TM9SF3Q9HD45 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TM9SF3Q9HD45 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TM9SF3Q9HD45 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TM9SF3Q9HD45 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
TM9SF3Q9HD45 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.63■■□□□ 1.69
TM9SF3Q9HD45 ABHD17AP5-201ENST00000580133 923 ntBASIC25.63■■□□□ 1.69
TM9SF3Q9HD45 RNF126P1-201ENST00000567452 1320 ntBASIC25.63■■□□□ 1.69
TM9SF3Q9HD45 ABCB10P1-201ENST00000614297 2181 ntBASIC25.62■■□□□ 1.69
TM9SF3Q9HD45 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TM9SF3Q9HD45 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TM9SF3Q9HD45 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
TM9SF3Q9HD45 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TM9SF3Q9HD45 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.6■■□□□ 1.69
TM9SF3Q9HD45 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TM9SF3Q9HD45 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.6■■□□□ 1.69
TM9SF3Q9HD45 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.6■■□□□ 1.69
TM9SF3Q9HD45 AC135983.2-203ENST00000454486 1613 ntBASIC25.59■■□□□ 1.69
TM9SF3Q9HD45 WHAMMP2-203ENST00000563942 1603 ntBASIC25.59■■□□□ 1.69
TM9SF3Q9HD45 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TM9SF3Q9HD45 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TM9SF3Q9HD45 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.58■■□□□ 1.69
TM9SF3Q9HD45 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.58■■□□□ 1.69
TM9SF3Q9HD45 AC008813.1-201ENST00000536597 885 ntBASIC25.58■■□□□ 1.69
TM9SF3Q9HD45 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
TM9SF3Q9HD45 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.57■■□□□ 1.68
TM9SF3Q9HD45 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TM9SF3Q9HD45 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TM9SF3Q9HD45 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
TM9SF3Q9HD45 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
TM9SF3Q9HD45 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TM9SF3Q9HD45 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
TM9SF3Q9HD45 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
TM9SF3Q9HD45 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TM9SF3Q9HD45 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.55■■□□□ 1.68
TM9SF3Q9HD45 AC022413.1-201ENST00000624602 984 ntBASIC25.55■■□□□ 1.68
TM9SF3Q9HD45 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
TM9SF3Q9HD45 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TM9SF3Q9HD45 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
TM9SF3Q9HD45 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TM9SF3Q9HD45 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
TM9SF3Q9HD45 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
TM9SF3Q9HD45 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
TM9SF3Q9HD45 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TM9SF3Q9HD45 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
TM9SF3Q9HD45 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.52■■□□□ 1.68
TM9SF3Q9HD45 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.52■■□□□ 1.68
TM9SF3Q9HD45 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.52■■□□□ 1.68
TM9SF3Q9HD45 AL135925.1-201ENST00000605920 1701 ntBASIC25.51■■□□□ 1.68
TM9SF3Q9HD45 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TM9SF3Q9HD45 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TM9SF3Q9HD45 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TM9SF3Q9HD45 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TM9SF3Q9HD45 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TM9SF3Q9HD45 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
TM9SF3Q9HD45 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
TM9SF3Q9HD45 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TM9SF3Q9HD45 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
TM9SF3Q9HD45 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TM9SF3Q9HD45 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TM9SF3Q9HD45 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
TM9SF3Q9HD45 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TM9SF3Q9HD45 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
TM9SF3Q9HD45 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms