Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF48Q96MX3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.92■□□□□ 0.94
ZNF48Q96MX3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.92■□□□□ 0.94
ZNF48Q96MX3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF48Q96MX3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF48Q96MX3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ZNF48Q96MX3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ZNF48Q96MX3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF48Q96MX3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF48Q96MX3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.91■□□□□ 0.94
ZNF48Q96MX3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.91■□□□□ 0.94
ZNF48Q96MX3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNF48Q96MX3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF48Q96MX3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZNF48Q96MX3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF48Q96MX3 ABCB10P1-201ENST00000614297 2181 ntBASIC20.89■□□□□ 0.93
ZNF48Q96MX3 AC127502.1-201ENST00000399971 1502 ntBASIC20.88■□□□□ 0.93
ZNF48Q96MX3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF48Q96MX3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF48Q96MX3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ZNF48Q96MX3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF48Q96MX3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ZNF48Q96MX3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF48Q96MX3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ZNF48Q96MX3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF48Q96MX3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF48Q96MX3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF48Q96MX3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF48Q96MX3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF48Q96MX3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF48Q96MX3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF48Q96MX3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF48Q96MX3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF48Q96MX3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF48Q96MX3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ZNF48Q96MX3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF48Q96MX3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.84■□□□□ 0.93
ZNF48Q96MX3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF48Q96MX3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF48Q96MX3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF48Q96MX3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF48Q96MX3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
ZNF48Q96MX3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.83■□□□□ 0.92
ZNF48Q96MX3 WHAMMP2-203ENST00000563942 1603 ntBASIC20.82■□□□□ 0.92
ZNF48Q96MX3 AL135925.1-201ENST00000605920 1701 ntBASIC20.82■□□□□ 0.92
ZNF48Q96MX3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF48Q96MX3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF48Q96MX3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF48Q96MX3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
ZNF48Q96MX3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ZNF48Q96MX3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF48Q96MX3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF48Q96MX3 GPX1-201ENST00000419349 1106 ntBASIC20.81■□□□□ 0.92
ZNF48Q96MX3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ZNF48Q96MX3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF48Q96MX3 AC135983.2-203ENST00000454486 1613 ntBASIC20.81■□□□□ 0.92
ZNF48Q96MX3 ST7-AS1-201ENST00000456775 1889 ntBASIC20.8■□□□□ 0.92
ZNF48Q96MX3 RARRES2P2-201ENST00000394842 485 ntBASIC20.8■□□□□ 0.92
ZNF48Q96MX3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.8■□□□□ 0.92
ZNF48Q96MX3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF48Q96MX3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.79■□□□□ 0.92
ZNF48Q96MX3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF48Q96MX3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ZNF48Q96MX3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF48Q96MX3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF48Q96MX3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
ZNF48Q96MX3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF48Q96MX3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF48Q96MX3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF48Q96MX3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF48Q96MX3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF48Q96MX3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ZNF48Q96MX3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ZNF48Q96MX3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF48Q96MX3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF48Q96MX3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ZNF48Q96MX3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF48Q96MX3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF48Q96MX3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF48Q96MX3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF48Q96MX3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.75■□□□□ 0.91
ZNF48Q96MX3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF48Q96MX3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF48Q96MX3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF48Q96MX3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF48Q96MX3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ZNF48Q96MX3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF48Q96MX3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF48Q96MX3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF48Q96MX3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF48Q96MX3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ZNF48Q96MX3 RNF126P1-201ENST00000567452 1320 ntBASIC20.72■□□□□ 0.91
ZNF48Q96MX3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF48Q96MX3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF48Q96MX3 ABCB10P3-201ENST00000561950 2166 ntBASIC20.71■□□□□ 0.91
ZNF48Q96MX3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF48Q96MX3 AC008813.1-201ENST00000536597 885 ntBASIC20.71■□□□□ 0.91
ZNF48Q96MX3 ABHD17AP5-201ENST00000580133 923 ntBASIC20.71■□□□□ 0.91
ZNF48Q96MX3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
ZNF48Q96MX3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms