Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TMEM40Q8WWA1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
TMEM40Q8WWA1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
TMEM40Q8WWA1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
TMEM40Q8WWA1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMEM40Q8WWA1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.3■■■□□ 2.12
TMEM40Q8WWA1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMEM40Q8WWA1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMEM40Q8WWA1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.3■■■□□ 2.12
TMEM40Q8WWA1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TMEM40Q8WWA1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMEM40Q8WWA1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
TMEM40Q8WWA1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
TMEM40Q8WWA1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TMEM40Q8WWA1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.28■■■□□ 2.12
TMEM40Q8WWA1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TMEM40Q8WWA1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.28■■■□□ 2.12
TMEM40Q8WWA1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TMEM40Q8WWA1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TMEM40Q8WWA1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
TMEM40Q8WWA1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TMEM40Q8WWA1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TMEM40Q8WWA1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TMEM40Q8WWA1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
TMEM40Q8WWA1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
TMEM40Q8WWA1 ST7-AS1-201ENST00000456775 1889 ntBASIC28.24■■■□□ 2.11
TMEM40Q8WWA1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TMEM40Q8WWA1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TMEM40Q8WWA1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TMEM40Q8WWA1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TMEM40Q8WWA1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.22■■■□□ 2.11
TMEM40Q8WWA1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
TMEM40Q8WWA1 AC110285.7-201ENST00000624417 1536 ntBASIC28.21■■■□□ 2.11
TMEM40Q8WWA1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TMEM40Q8WWA1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TMEM40Q8WWA1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TMEM40Q8WWA1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TMEM40Q8WWA1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.2■■■□□ 2.1
TMEM40Q8WWA1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.2■■■□□ 2.1
TMEM40Q8WWA1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.2■■■□□ 2.1
TMEM40Q8WWA1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
TMEM40Q8WWA1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.19■■■□□ 2.1
TMEM40Q8WWA1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.19■■■□□ 2.1
TMEM40Q8WWA1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TMEM40Q8WWA1 GPX1-201ENST00000419349 1106 ntBASIC28.18■■■□□ 2.1
TMEM40Q8WWA1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TMEM40Q8WWA1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
TMEM40Q8WWA1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
TMEM40Q8WWA1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.17■■■□□ 2.1
TMEM40Q8WWA1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.17■■■□□ 2.1
TMEM40Q8WWA1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.17■■■□□ 2.1
TMEM40Q8WWA1 AC008813.1-201ENST00000536597 885 ntBASIC28.16■■■□□ 2.1
TMEM40Q8WWA1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
TMEM40Q8WWA1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TMEM40Q8WWA1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TMEM40Q8WWA1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TMEM40Q8WWA1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TMEM40Q8WWA1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
TMEM40Q8WWA1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TMEM40Q8WWA1 RARRES2P2-201ENST00000394842 485 ntBASIC28.14■■■□□ 2.1
TMEM40Q8WWA1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.14■■■□□ 2.1
TMEM40Q8WWA1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TMEM40Q8WWA1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TMEM40Q8WWA1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TMEM40Q8WWA1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
TMEM40Q8WWA1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.13■■■□□ 2.09
TMEM40Q8WWA1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TMEM40Q8WWA1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TMEM40Q8WWA1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.12■■■□□ 2.09
TMEM40Q8WWA1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMEM40Q8WWA1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMEM40Q8WWA1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.11■■■□□ 2.09
TMEM40Q8WWA1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMEM40Q8WWA1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.11■■■□□ 2.09
TMEM40Q8WWA1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
TMEM40Q8WWA1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TMEM40Q8WWA1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.1■■■□□ 2.09
TMEM40Q8WWA1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
TMEM40Q8WWA1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TMEM40Q8WWA1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
TMEM40Q8WWA1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
TMEM40Q8WWA1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.09■■■□□ 2.09
TMEM40Q8WWA1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TMEM40Q8WWA1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.09■■■□□ 2.09
TMEM40Q8WWA1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.09■■■□□ 2.09
TMEM40Q8WWA1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TMEM40Q8WWA1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.08■■■□□ 2.09
TMEM40Q8WWA1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
TMEM40Q8WWA1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TMEM40Q8WWA1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.08■■■□□ 2.09
TMEM40Q8WWA1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
TMEM40Q8WWA1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.07■■■□□ 2.08
TMEM40Q8WWA1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TMEM40Q8WWA1 RNF126P1-201ENST00000567452 1320 ntBASIC28.06■■■□□ 2.08
TMEM40Q8WWA1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
TMEM40Q8WWA1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
TMEM40Q8WWA1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
TMEM40Q8WWA1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
TMEM40Q8WWA1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.05■■■□□ 2.08
TMEM40Q8WWA1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms