Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TMEM40Q8WWA1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
TMEM40Q8WWA1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
TMEM40Q8WWA1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
TMEM40Q8WWA1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMEM40Q8WWA1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.3■■■□□ 2.12
TMEM40Q8WWA1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMEM40Q8WWA1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMEM40Q8WWA1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.3■■■□□ 2.12
TMEM40Q8WWA1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TMEM40Q8WWA1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMEM40Q8WWA1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
TMEM40Q8WWA1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
TMEM40Q8WWA1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TMEM40Q8WWA1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.28■■■□□ 2.12
TMEM40Q8WWA1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TMEM40Q8WWA1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.28■■■□□ 2.12
TMEM40Q8WWA1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TMEM40Q8WWA1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TMEM40Q8WWA1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
TMEM40Q8WWA1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TMEM40Q8WWA1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TMEM40Q8WWA1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TMEM40Q8WWA1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
TMEM40Q8WWA1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
TMEM40Q8WWA1 ST7-AS1-201ENST00000456775 1889 ntBASIC28.24■■■□□ 2.11
TMEM40Q8WWA1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TMEM40Q8WWA1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TMEM40Q8WWA1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TMEM40Q8WWA1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TMEM40Q8WWA1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.22■■■□□ 2.11
TMEM40Q8WWA1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
TMEM40Q8WWA1 AC110285.7-201ENST00000624417 1536 ntBASIC28.21■■■□□ 2.11
TMEM40Q8WWA1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TMEM40Q8WWA1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TMEM40Q8WWA1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TMEM40Q8WWA1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TMEM40Q8WWA1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.2■■■□□ 2.1
TMEM40Q8WWA1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.2■■■□□ 2.1
TMEM40Q8WWA1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.2■■■□□ 2.1
TMEM40Q8WWA1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
TMEM40Q8WWA1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.19■■■□□ 2.1
TMEM40Q8WWA1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.19■■■□□ 2.1
TMEM40Q8WWA1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TMEM40Q8WWA1 GPX1-201ENST00000419349 1106 ntBASIC28.18■■■□□ 2.1
TMEM40Q8WWA1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TMEM40Q8WWA1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
TMEM40Q8WWA1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
TMEM40Q8WWA1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.17■■■□□ 2.1
TMEM40Q8WWA1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.17■■■□□ 2.1
TMEM40Q8WWA1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.17■■■□□ 2.1
TMEM40Q8WWA1 AC008813.1-201ENST00000536597 885 ntBASIC28.16■■■□□ 2.1
TMEM40Q8WWA1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
TMEM40Q8WWA1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TMEM40Q8WWA1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TMEM40Q8WWA1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TMEM40Q8WWA1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TMEM40Q8WWA1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
TMEM40Q8WWA1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TMEM40Q8WWA1 RARRES2P2-201ENST00000394842 485 ntBASIC28.14■■■□□ 2.1
TMEM40Q8WWA1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.14■■■□□ 2.1
TMEM40Q8WWA1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TMEM40Q8WWA1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TMEM40Q8WWA1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TMEM40Q8WWA1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
TMEM40Q8WWA1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.13■■■□□ 2.09
TMEM40Q8WWA1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TMEM40Q8WWA1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TMEM40Q8WWA1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.12■■■□□ 2.09
TMEM40Q8WWA1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMEM40Q8WWA1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMEM40Q8WWA1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.11■■■□□ 2.09
TMEM40Q8WWA1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMEM40Q8WWA1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.11■■■□□ 2.09
TMEM40Q8WWA1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
TMEM40Q8WWA1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TMEM40Q8WWA1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.1■■■□□ 2.09
TMEM40Q8WWA1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
TMEM40Q8WWA1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TMEM40Q8WWA1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
TMEM40Q8WWA1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
TMEM40Q8WWA1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.09■■■□□ 2.09
TMEM40Q8WWA1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TMEM40Q8WWA1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.09■■■□□ 2.09
TMEM40Q8WWA1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.09■■■□□ 2.09
TMEM40Q8WWA1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TMEM40Q8WWA1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.08■■■□□ 2.09
TMEM40Q8WWA1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
TMEM40Q8WWA1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TMEM40Q8WWA1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.08■■■□□ 2.09
TMEM40Q8WWA1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
TMEM40Q8WWA1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.07■■■□□ 2.08
TMEM40Q8WWA1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TMEM40Q8WWA1 RNF126P1-201ENST00000567452 1320 ntBASIC28.06■■■□□ 2.08
TMEM40Q8WWA1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
TMEM40Q8WWA1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
TMEM40Q8WWA1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
TMEM40Q8WWA1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
TMEM40Q8WWA1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.05■■■□□ 2.08
TMEM40Q8WWA1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms