Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD6Q8TD26 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD6Q8TD26 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.21■■□□□ 1.47
CHD6Q8TD26 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD6Q8TD26 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CHD6Q8TD26 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.2■■□□□ 1.47
CHD6Q8TD26 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHD6Q8TD26 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHD6Q8TD26 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHD6Q8TD26 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.2■■□□□ 1.46
CHD6Q8TD26 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHD6Q8TD26 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.19■■□□□ 1.46
CHD6Q8TD26 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CHD6Q8TD26 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CHD6Q8TD26 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHD6Q8TD26 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.18■■□□□ 1.46
CHD6Q8TD26 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD6Q8TD26 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.17■■□□□ 1.46
CHD6Q8TD26 SPCS2P3-201ENST00000500401 656 ntBASIC24.17■■□□□ 1.46
CHD6Q8TD26 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.17■■□□□ 1.46
CHD6Q8TD26 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.17■■□□□ 1.46
CHD6Q8TD26 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.17■■□□□ 1.46
CHD6Q8TD26 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
CHD6Q8TD26 KRT8P33-201ENST00000508125 1423 ntBASIC24.16■■□□□ 1.46
CHD6Q8TD26 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CHD6Q8TD26 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.15■■□□□ 1.46
CHD6Q8TD26 DUX4L18-201ENST00000553347 1267 ntBASIC24.15■■□□□ 1.46
CHD6Q8TD26 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD6Q8TD26 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD6Q8TD26 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.15■■□□□ 1.46
CHD6Q8TD26 RP9P-202ENST00000450133 1212 ntBASIC24.14■■□□□ 1.46
CHD6Q8TD26 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.14■■□□□ 1.46
CHD6Q8TD26 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
CHD6Q8TD26 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CHD6Q8TD26 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC24.13■■□□□ 1.45
CHD6Q8TD26 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHD6Q8TD26 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CHD6Q8TD26 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHD6Q8TD26 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
CHD6Q8TD26 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CHD6Q8TD26 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHD6Q8TD26 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.09■■□□□ 1.45
CHD6Q8TD26 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD6Q8TD26 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD6Q8TD26 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.08■■□□□ 1.45
CHD6Q8TD26 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.08■■□□□ 1.45
CHD6Q8TD26 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.08■■□□□ 1.45
CHD6Q8TD26 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CHD6Q8TD26 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CHD6Q8TD26 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CHD6Q8TD26 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD6Q8TD26 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD6Q8TD26 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD6Q8TD26 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CHD6Q8TD26 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CHD6Q8TD26 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHD6Q8TD26 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHD6Q8TD26 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CHD6Q8TD26 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CHD6Q8TD26 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.05■■□□□ 1.44
CHD6Q8TD26 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.04■■□□□ 1.44
CHD6Q8TD26 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
CHD6Q8TD26 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHD6Q8TD26 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.03■■□□□ 1.44
CHD6Q8TD26 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CHD6Q8TD26 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.02■■□□□ 1.44
CHD6Q8TD26 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CHD6Q8TD26 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD6Q8TD26 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHD6Q8TD26 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.98■■□□□ 1.43
CHD6Q8TD26 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
CHD6Q8TD26 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CHD6Q8TD26 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
CHD6Q8TD26 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHD6Q8TD26 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHD6Q8TD26 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CHD6Q8TD26 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CHD6Q8TD26 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
CHD6Q8TD26 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHD6Q8TD26 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CHD6Q8TD26 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.94■■□□□ 1.42
CHD6Q8TD26 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
CHD6Q8TD26 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
CHD6Q8TD26 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHD6Q8TD26 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.92■■□□□ 1.42
CHD6Q8TD26 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.92■■□□□ 1.42
CHD6Q8TD26 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.92■■□□□ 1.42
CHD6Q8TD26 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.92■■□□□ 1.42
CHD6Q8TD26 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.91■■□□□ 1.42
CHD6Q8TD26 AC010980.1-201ENST00000587192 1142 ntBASIC23.91■■□□□ 1.42
CHD6Q8TD26 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD6Q8TD26 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD6Q8TD26 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD6Q8TD26 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.91■■□□□ 1.42
CHD6Q8TD26 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD6Q8TD26 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD6Q8TD26 DUX4L9-201ENST00000449051 1259 ntBASIC23.9■■□□□ 1.42
CHD6Q8TD26 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.9■■□□□ 1.42
CHD6Q8TD26 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CHD6Q8TD26 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms