Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
HIST3H2BBQ8N257 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HIST3H2BBQ8N257 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HIST3H2BBQ8N257 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST3H2BBQ8N257 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.71
HIST3H2BBQ8N257 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST3H2BBQ8N257 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
HIST3H2BBQ8N257 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST3H2BBQ8N257 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST3H2BBQ8N257 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST3H2BBQ8N257 AC091060.1-201ENST00000623524 1766 ntBASIC19.5■□□□□ 0.71
HIST3H2BBQ8N257 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HIST3H2BBQ8N257 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST3H2BBQ8N257 AL139393.2-201ENST00000608721 2025 ntBASIC19.49■□□□□ 0.71
HIST3H2BBQ8N257 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIST3H2BBQ8N257 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.48■□□□□ 0.71
HIST3H2BBQ8N257 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIST3H2BBQ8N257 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
HIST3H2BBQ8N257 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIST3H2BBQ8N257 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIST3H2BBQ8N257 LINC00543-201ENST00000567234 1845 ntBASIC19.47■□□□□ 0.71
HIST3H2BBQ8N257 BX255925.1-201ENST00000566954 1854 ntBASIC19.47■□□□□ 0.71
HIST3H2BBQ8N257 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HIST3H2BBQ8N257 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.47■□□□□ 0.71
HIST3H2BBQ8N257 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HIST3H2BBQ8N257 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.46■□□□□ 0.71
HIST3H2BBQ8N257 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HIST3H2BBQ8N257 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HIST3H2BBQ8N257 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST3H2BBQ8N257 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HIST3H2BBQ8N257 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HIST3H2BBQ8N257 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HIST3H2BBQ8N257 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HIST3H2BBQ8N257 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST3H2BBQ8N257 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
HIST3H2BBQ8N257 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST3H2BBQ8N257 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.43■□□□□ 0.7
HIST3H2BBQ8N257 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST3H2BBQ8N257 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST3H2BBQ8N257 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST3H2BBQ8N257 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST3H2BBQ8N257 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HIST3H2BBQ8N257 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HIST3H2BBQ8N257 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST3H2BBQ8N257 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST3H2BBQ8N257 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST3H2BBQ8N257 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST3H2BBQ8N257 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HIST3H2BBQ8N257 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.41■□□□□ 0.7
HIST3H2BBQ8N257 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIST3H2BBQ8N257 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.41■□□□□ 0.7
HIST3H2BBQ8N257 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIST3H2BBQ8N257 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.41■□□□□ 0.7
HIST3H2BBQ8N257 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIST3H2BBQ8N257 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.4■□□□□ 0.7
HIST3H2BBQ8N257 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.39■□□□□ 0.7
HIST3H2BBQ8N257 AC012676.1-201ENST00000574705 1949 ntBASIC19.39■□□□□ 0.7
HIST3H2BBQ8N257 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIST3H2BBQ8N257 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HIST3H2BBQ8N257 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HIST3H2BBQ8N257 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIST3H2BBQ8N257 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
HIST3H2BBQ8N257 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST3H2BBQ8N257 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HIST3H2BBQ8N257 CLDN5-201ENST00000403084 2357 ntBASIC19.38■□□□□ 0.69
HIST3H2BBQ8N257 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST3H2BBQ8N257 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST3H2BBQ8N257 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HIST3H2BBQ8N257 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.37■□□□□ 0.69
HIST3H2BBQ8N257 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.37■□□□□ 0.69
HIST3H2BBQ8N257 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST3H2BBQ8N257 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST3H2BBQ8N257 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST3H2BBQ8N257 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST3H2BBQ8N257 AL135925.1-201ENST00000605920 1701 ntBASIC19.36■□□□□ 0.69
HIST3H2BBQ8N257 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST3H2BBQ8N257 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HIST3H2BBQ8N257 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HIST3H2BBQ8N257 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC19.34■□□□□ 0.69
HIST3H2BBQ8N257 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST3H2BBQ8N257 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.34■□□□□ 0.69
HIST3H2BBQ8N257 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.34■□□□□ 0.69
HIST3H2BBQ8N257 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST3H2BBQ8N257 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIST3H2BBQ8N257 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
HIST3H2BBQ8N257 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HIST3H2BBQ8N257 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HIST3H2BBQ8N257 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HIST3H2BBQ8N257 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HIST3H2BBQ8N257 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HIST3H2BBQ8N257 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST3H2BBQ8N257 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST3H2BBQ8N257 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HIST3H2BBQ8N257 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HIST3H2BBQ8N257 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HIST3H2BBQ8N257 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIST3H2BBQ8N257 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST3H2BBQ8N257 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST3H2BBQ8N257 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST3H2BBQ8N257 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms