Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 DUX4L13-201ENST00000554103 1267 ntBASIC31.62■■■□□ 2.65
TNNI3KQ59H18 DUX4L15-201ENST00000611059 1267 ntBASIC31.62■■■□□ 2.65
TNNI3KQ59H18 DUX4L23-201ENST00000615195 1269 ntBASIC31.62■■■□□ 2.65
TNNI3KQ59H18 DUX4L24-201ENST00000617576 1269 ntBASIC31.62■■■□□ 2.65
TNNI3KQ59H18 DUX4L22-201ENST00000618238 1269 ntBASIC31.62■■■□□ 2.65
TNNI3KQ59H18 DUX4L20-201ENST00000619712 1269 ntBASIC31.62■■■□□ 2.65
TNNI3KQ59H18 DUX4L21-201ENST00000622058 1269 ntBASIC31.62■■■□□ 2.65
TNNI3KQ59H18 DUX4L10-201ENST00000622460 1267 ntBASIC31.62■■■□□ 2.65
TNNI3KQ59H18 CR559946.2-201ENST00000623684 991 ntBASIC31.62■■■□□ 2.65
TNNI3KQ59H18 DUX4L25-201ENST00000624915 1269 ntBASIC31.62■■■□□ 2.65
TNNI3KQ59H18 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.62■■■□□ 2.65
TNNI3KQ59H18 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.61■■■□□ 2.65
TNNI3KQ59H18 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
TNNI3KQ59H18 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
TNNI3KQ59H18 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.61■■■□□ 2.65
TNNI3KQ59H18 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
TNNI3KQ59H18 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TNNI3KQ59H18 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TNNI3KQ59H18 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TNNI3KQ59H18 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
TNNI3KQ59H18 MIR3648-2-201ENST00000581792 180 ntBASIC31.59■■■□□ 2.65
TNNI3KQ59H18 MIR3648-1-201ENST00000615959 180 ntBASIC31.59■■■□□ 2.65
TNNI3KQ59H18 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TNNI3KQ59H18 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.58■■■□□ 2.65
TNNI3KQ59H18 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.58■■■□□ 2.65
TNNI3KQ59H18 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
TNNI3KQ59H18 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.57■■■□□ 2.65
TNNI3KQ59H18 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TNNI3KQ59H18 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TNNI3KQ59H18 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TNNI3KQ59H18 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.57■■■□□ 2.64
TNNI3KQ59H18 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.57■■■□□ 2.64
TNNI3KQ59H18 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
TNNI3KQ59H18 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.57■■■□□ 2.64
TNNI3KQ59H18 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
TNNI3KQ59H18 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.56■■■□□ 2.64
TNNI3KQ59H18 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.56■■■□□ 2.64
TNNI3KQ59H18 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
TNNI3KQ59H18 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
TNNI3KQ59H18 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.55■■■□□ 2.64
TNNI3KQ59H18 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.55■■■□□ 2.64
TNNI3KQ59H18 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.55■■■□□ 2.64
TNNI3KQ59H18 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
TNNI3KQ59H18 AC016575.1-201ENST00000607026 382 ntBASIC31.54■■■□□ 2.64
TNNI3KQ59H18 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
TNNI3KQ59H18 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.53■■■□□ 2.64
TNNI3KQ59H18 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
TNNI3KQ59H18 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.52■■■□□ 2.64
TNNI3KQ59H18 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.52■■■□□ 2.64
TNNI3KQ59H18 ABCB10P3-201ENST00000561950 2166 ntBASIC31.52■■■□□ 2.64
TNNI3KQ59H18 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.52■■■□□ 2.64
TNNI3KQ59H18 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TNNI3KQ59H18 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.51■■■□□ 2.63
TNNI3KQ59H18 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.51■■■□□ 2.63
TNNI3KQ59H18 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TNNI3KQ59H18 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
TNNI3KQ59H18 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.5■■■□□ 2.63
TNNI3KQ59H18 AC139426.1-201ENST00000568218 2529 ntBASIC31.5■■■□□ 2.63
TNNI3KQ59H18 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TNNI3KQ59H18 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.49■■■□□ 2.63
TNNI3KQ59H18 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TNNI3KQ59H18 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.48■■■□□ 2.63
TNNI3KQ59H18 AC100797.4-201ENST00000631653 1827 ntBASIC31.48■■■□□ 2.63
TNNI3KQ59H18 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TNNI3KQ59H18 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.48■■■□□ 2.63
TNNI3KQ59H18 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TNNI3KQ59H18 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.47■■■□□ 2.63
TNNI3KQ59H18 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TNNI3KQ59H18 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.47■■■□□ 2.63
TNNI3KQ59H18 HLA-V-202ENST00000446817 847 ntBASIC31.47■■■□□ 2.63
TNNI3KQ59H18 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
TNNI3KQ59H18 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
TNNI3KQ59H18 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TNNI3KQ59H18 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
TNNI3KQ59H18 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
TNNI3KQ59H18 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.46■■■□□ 2.63
TNNI3KQ59H18 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TNNI3KQ59H18 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.46■■■□□ 2.63
TNNI3KQ59H18 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TNNI3KQ59H18 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
TNNI3KQ59H18 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TNNI3KQ59H18 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TNNI3KQ59H18 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.42■■■□□ 2.62
TNNI3KQ59H18 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.41■■■□□ 2.62
TNNI3KQ59H18 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.41■■■□□ 2.62
TNNI3KQ59H18 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
TNNI3KQ59H18 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
TNNI3KQ59H18 MIR639-201ENST00000384974 98 ntBASIC31.41■■■□□ 2.62
TNNI3KQ59H18 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.41■■■□□ 2.62
TNNI3KQ59H18 AC110285.7-201ENST00000624417 1536 ntBASIC31.4■■■□□ 2.62
TNNI3KQ59H18 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
TNNI3KQ59H18 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.4■■■□□ 2.62
TNNI3KQ59H18 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
TNNI3KQ59H18 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.39■■■□□ 2.61
TNNI3KQ59H18 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TNNI3KQ59H18 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
TNNI3KQ59H18 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
TNNI3KQ59H18 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
TNNI3KQ59H18 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.37■■■□□ 2.61
TNNI3KQ59H18 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms