Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
SHROOM1Q2M3G4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SHROOM1Q2M3G4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.4■■■□□ 2.46
SHROOM1Q2M3G4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SHROOM1Q2M3G4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
SHROOM1Q2M3G4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.4■■■□□ 2.46
SHROOM1Q2M3G4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SHROOM1Q2M3G4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.38■■■□□ 2.45
SHROOM1Q2M3G4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
SHROOM1Q2M3G4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SHROOM1Q2M3G4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.36■■■□□ 2.45
SHROOM1Q2M3G4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.36■■■□□ 2.45
SHROOM1Q2M3G4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SHROOM1Q2M3G4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SHROOM1Q2M3G4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SHROOM1Q2M3G4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SHROOM1Q2M3G4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.33■■■□□ 2.45
SHROOM1Q2M3G4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SHROOM1Q2M3G4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SHROOM1Q2M3G4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
SHROOM1Q2M3G4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SHROOM1Q2M3G4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.32■■■□□ 2.44
SHROOM1Q2M3G4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
SHROOM1Q2M3G4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SHROOM1Q2M3G4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SHROOM1Q2M3G4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
SHROOM1Q2M3G4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.31■■■□□ 2.44
SHROOM1Q2M3G4 GPX1-201ENST00000419349 1106 ntBASIC30.3■■■□□ 2.44
SHROOM1Q2M3G4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SHROOM1Q2M3G4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SHROOM1Q2M3G4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SHROOM1Q2M3G4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.29■■■□□ 2.44
SHROOM1Q2M3G4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SHROOM1Q2M3G4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SHROOM1Q2M3G4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
SHROOM1Q2M3G4 ST7-AS1-201ENST00000456775 1889 ntBASIC30.27■■■□□ 2.44
SHROOM1Q2M3G4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SHROOM1Q2M3G4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.27■■■□□ 2.44
SHROOM1Q2M3G4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.27■■■□□ 2.44
SHROOM1Q2M3G4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
SHROOM1Q2M3G4 RARRES2P2-201ENST00000394842 485 ntBASIC30.26■■■□□ 2.43
SHROOM1Q2M3G4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
SHROOM1Q2M3G4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
SHROOM1Q2M3G4 AC110285.7-201ENST00000624417 1536 ntBASIC30.26■■■□□ 2.43
SHROOM1Q2M3G4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SHROOM1Q2M3G4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SHROOM1Q2M3G4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.25■■■□□ 2.43
SHROOM1Q2M3G4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.25■■■□□ 2.43
SHROOM1Q2M3G4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SHROOM1Q2M3G4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.24■■■□□ 2.43
SHROOM1Q2M3G4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
SHROOM1Q2M3G4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.22■■■□□ 2.43
SHROOM1Q2M3G4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SHROOM1Q2M3G4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SHROOM1Q2M3G4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
SHROOM1Q2M3G4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SHROOM1Q2M3G4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.21■■■□□ 2.43
SHROOM1Q2M3G4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SHROOM1Q2M3G4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.43
SHROOM1Q2M3G4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.2■■■□□ 2.42
SHROOM1Q2M3G4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.19■■■□□ 2.42
SHROOM1Q2M3G4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SHROOM1Q2M3G4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SHROOM1Q2M3G4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SHROOM1Q2M3G4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.18■■■□□ 2.42
SHROOM1Q2M3G4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.18■■■□□ 2.42
SHROOM1Q2M3G4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.17■■■□□ 2.42
SHROOM1Q2M3G4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
SHROOM1Q2M3G4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.17■■■□□ 2.42
SHROOM1Q2M3G4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
SHROOM1Q2M3G4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SHROOM1Q2M3G4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SHROOM1Q2M3G4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SHROOM1Q2M3G4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.15■■■□□ 2.42
SHROOM1Q2M3G4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
SHROOM1Q2M3G4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SHROOM1Q2M3G4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SHROOM1Q2M3G4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SHROOM1Q2M3G4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
SHROOM1Q2M3G4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
SHROOM1Q2M3G4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.14■■■□□ 2.42
SHROOM1Q2M3G4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
SHROOM1Q2M3G4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.13■■■□□ 2.41
SHROOM1Q2M3G4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SHROOM1Q2M3G4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.13■■■□□ 2.41
SHROOM1Q2M3G4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SHROOM1Q2M3G4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.13■■■□□ 2.41
SHROOM1Q2M3G4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.13■■■□□ 2.41
SHROOM1Q2M3G4 AC008813.1-201ENST00000536597 885 ntBASIC30.12■■■□□ 2.41
SHROOM1Q2M3G4 AC022413.1-201ENST00000624602 984 ntBASIC30.12■■■□□ 2.41
SHROOM1Q2M3G4 RNF126P1-201ENST00000567452 1320 ntBASIC30.12■■■□□ 2.41
SHROOM1Q2M3G4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
SHROOM1Q2M3G4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
SHROOM1Q2M3G4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
SHROOM1Q2M3G4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
SHROOM1Q2M3G4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SHROOM1Q2M3G4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.11■■■□□ 2.41
SHROOM1Q2M3G4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SHROOM1Q2M3G4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SHROOM1Q2M3G4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms