Protein–RNA interactions for Protein: P47013

LCB3, Dihydrosphingosine 1-phosphate phosphatase LCB3, yeastyeast

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB3P47013 tA(AGC)FtA(AGC)F 73 nt6.33□□□□□ -1.4
LCB3P47013 tA(AGC)GtA(AGC)G 73 nt6.33□□□□□ -1.4
LCB3P47013 tA(AGC)HtA(AGC)H 73 nt6.33□□□□□ -1.4
LCB3P47013 tA(AGC)JtA(AGC)J 73 nt6.33□□□□□ -1.4
LCB3P47013 tA(AGC)K1tA(AGC)K1 73 nt6.33□□□□□ -1.4
LCB3P47013 tA(AGC)K2tA(AGC)K2 73 nt6.33□□□□□ -1.4
LCB3P47013 tA(AGC)LtA(AGC)L 73 nt6.33□□□□□ -1.4
LCB3P47013 tA(AGC)M1tA(AGC)M1 73 nt6.33□□□□□ -1.4
LCB3P47013 tA(AGC)M2tA(AGC)M2 73 nt6.33□□□□□ -1.4
LCB3P47013 tA(AGC)PtA(AGC)P 73 nt6.33□□□□□ -1.4
LCB3P47013 YFR020WYFR020W 699 nt6.33□□□□□ -1.4
LCB3P47013 ORT1YOR130C 879 nt6.33□□□□□ -1.4
LCB3P47013 MOB1YIL106W 945 nt6.32□□□□□ -1.4
LCB3P47013 FLX1YIL134W 936 nt6.32□□□□□ -1.4
LCB3P47013 LYS20YDL182W 1287 nt6.31□□□□□ -1.4
LCB3P47013 GGC1YDL198C 903 nt6.31□□□□□ -1.4
LCB3P47013 IPL1YPL209C 1104 nt6.31□□□□□ -1.4
LCB3P47013 YRF1-1YDR545W 5391 nt6.31□□□□□ -1.4
LCB3P47013 YRF1-5YLR467W 5391 nt6.31□□□□□ -1.4
LCB3P47013 YRF1-8YOR396W 5391 nt6.31□□□□□ -1.4
LCB3P47013 ENO1YGR254W 1314 nt6.3□□□□□ -1.4
LCB3P47013 YMR210WYMR210W 1350 nt6.3□□□□□ -1.4
LCB3P47013 YBR056WYBR056W 1506 nt6.3□□□□□ -1.4
LCB3P47013 ADE16YLR028C 1776 nt6.29□□□□□ -1.4
LCB3P47013 RSM7YJR113C 744 nt6.29□□□□□ -1.4
LCB3P47013 LEA1YPL213W 717 nt6.28□□□□□ -1.4
LCB3P47013 snR4snR4 186 nt6.28□□□□□ -1.4
LCB3P47013 ABP1YCR088W 1779 nt6.28□□□□□ -1.4
LCB3P47013 CTF3YLR381W 2202 nt6.27□□□□□ -1.41
LCB3P47013 FTH1YBR207W 1398 nt6.27□□□□□ -1.41
LCB3P47013 YIR035CYIR035C 765 nt6.26□□□□□ -1.41
LCB3P47013 YJL009WYJL009W 327 nt6.26□□□□□ -1.41
LCB3P47013 YJR149WYJR149W 1215 nt6.26□□□□□ -1.41
LCB3P47013 AIM34YMR003W 597 nt6.26□□□□□ -1.41
LCB3P47013 MEP1YGR121C 1479 nt6.26□□□□□ -1.41
LCB3P47013 YJL064WYJL064W 396 nt6.25□□□□□ -1.41
LCB3P47013 CYC3YAL039C 810 nt6.25□□□□□ -1.41
LCB3P47013 SRP102YKL154W 735 nt6.25□□□□□ -1.41
LCB3P47013 SEN2YLR105C 1134 nt6.25□□□□□ -1.41
LCB3P47013 YLR280CYLR280C 351 nt6.25□□□□□ -1.41
LCB3P47013 BUB2YMR055C 921 nt6.25□□□□□ -1.41
LCB3P47013 YPL041CYPL041C 624 nt6.25□□□□□ -1.41
LCB3P47013 CBK1YNL161W 2271 nt6.24□□□□□ -1.41
LCB3P47013 MLS1YNL117W 1665 nt6.24□□□□□ -1.41
LCB3P47013 RNA170RNA170 169 nt6.24□□□□□ -1.41
LCB3P47013 YIL177CYIL177C 5277 nt6.24□□□□□ -1.41
LCB3P47013 HIS3YOR202W 663 nt6.23□□□□□ -1.41
LCB3P47013 BAP3YDR046C 1815 nt6.22□□□□□ -1.41
LCB3P47013 PFS2YNL317W 1398 nt6.22□□□□□ -1.41
LCB3P47013 ERO1YML130C 1692 nt6.22□□□□□ -1.41
LCB3P47013 TOP3YLR234W 1971 nt6.22□□□□□ -1.41
LCB3P47013 CMK2YOL016C 1344 nt6.22□□□□□ -1.41
LCB3P47013 SMC5YOL034W 3282 nt6.21□□□□□ -1.41
LCB3P47013 AFG2YLR397C 2343 nt6.21□□□□□ -1.41
LCB3P47013 YIL108WYIL108W 2091 nt6.21□□□□□ -1.41
LCB3P47013 PAU19YMR325W 375 nt6.21□□□□□ -1.42
LCB3P47013 MET22YOL064C 1074 nt6.21□□□□□ -1.42
LCB3P47013 YCR025CYCR025C 411 nt6.2□□□□□ -1.42
LCB3P47013 ITR1YDR497C 1755 nt6.2□□□□□ -1.42
LCB3P47013 SER2YGR208W 930 nt6.19□□□□□ -1.42
LCB3P47013 YLR460CYLR460C 1131 nt6.19□□□□□ -1.42
LCB3P47013 HEL1YKR017C 1656 nt6.18□□□□□ -1.42
LCB3P47013 MGM101YJR144W 810 nt6.18□□□□□ -1.42
LCB3P47013 LRO1YNR008W 1986 nt6.18□□□□□ -1.42
LCB3P47013 EHT1YBR177C 1356 nt6.18□□□□□ -1.42
LCB3P47013 PDC6YGR087C 1692 nt6.17□□□□□ -1.42
LCB3P47013 BUD31YCR063W 474 nt6.17□□□□□ -1.42
LCB3P47013 CHS7YHR142W 951 nt6.17□□□□□ -1.42
LCB3P47013 HSV2YGR223C 1347 nt6.17□□□□□ -1.42
LCB3P47013 MSB3YNL293W 1902 nt6.17□□□□□ -1.42
LCB3P47013 DIP5YPL265W 1827 nt6.16□□□□□ -1.42
LCB3P47013 YGR210CYGR210C 1236 nt6.16□□□□□ -1.42
LCB3P47013 ATP10YLR393W 840 nt6.16□□□□□ -1.42
LCB3P47013 DIA4YHR011W 1341 nt6.16□□□□□ -1.42
LCB3P47013 OCH1YGL038C 1443 nt6.16□□□□□ -1.42
LCB3P47013 MRN1YPL184C 1839 nt6.15□□□□□ -1.42
LCB3P47013 INO1YJL153C 1602 nt6.15□□□□□ -1.42
LCB3P47013 GLY1YEL046C 1164 nt6.15□□□□□ -1.42
LCB3P47013 OLA1YBR025C 1185 nt6.15□□□□□ -1.42
LCB3P47013 HTS1YPR033C 1641 nt6.14□□□□□ -1.43
LCB3P47013 CKI1YLR133W 1749 nt6.14□□□□□ -1.43
LCB3P47013 YCR061WYCR061W 1896 nt6.14□□□□□ -1.43
LCB3P47013 SLM3YDL033C 1254 nt6.14□□□□□ -1.43
LCB3P47013 CAK1YFL029C 1107 nt6.14□□□□□ -1.43
LCB3P47013 NAP1YKR048C 1254 nt6.14□□□□□ -1.43
LCB3P47013 YMR166CYMR166C 1107 nt6.14□□□□□ -1.43
LCB3P47013 CRN1YLR429W 1956 nt6.14□□□□□ -1.43
LCB3P47013 ECM27YJR106W 2178 nt6.14□□□□□ -1.43
LCB3P47013 CHA1YCL064C 1083 nt6.13□□□□□ -1.43
LCB3P47013 TGA1tA(UGC)A 73 nt6.13□□□□□ -1.43
LCB3P47013 tA(UGC)EtA(UGC)E 73 nt6.13□□□□□ -1.43
LCB3P47013 tA(UGC)GtA(UGC)G 73 nt6.13□□□□□ -1.43
LCB3P47013 tA(UGC)LtA(UGC)L 73 nt6.13□□□□□ -1.43
LCB3P47013 tA(UGC)OtA(UGC)O 73 nt6.13□□□□□ -1.43
LCB3P47013 YPL108WYPL108W 507 nt6.13□□□□□ -1.43
LCB3P47013 NDE2YDL085W 1638 nt6.13□□□□□ -1.43
LCB3P47013 SWM1YDR260C 513 nt6.12□□□□□ -1.43
LCB3P47013 HXT13YEL069C 1695 nt6.12□□□□□ -1.43
LCB3P47013 PRC1YMR297W 1599 nt6.12□□□□□ -1.43
LCB3P47013 PUP1YOR157C 786 nt6.12□□□□□ -1.43
Retrieved 100 of 7,029 protein–RNA pairs in 41.9 ms