Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.44■■□□□ 1.5
SSR2P43308 AC021231.2-201ENST00000594613 730 ntBASIC24.44■■□□□ 1.5
SSR2P43308 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.44■■□□□ 1.5
SSR2P43308 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
SSR2P43308 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
SSR2P43308 AC135983.2-203ENST00000454486 1613 ntBASIC24.43■■□□□ 1.5
SSR2P43308 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
SSR2P43308 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
SSR2P43308 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SSR2P43308 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SSR2P43308 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SSR2P43308 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
SSR2P43308 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.42■■□□□ 1.5
SSR2P43308 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SSR2P43308 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SSR2P43308 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SSR2P43308 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SSR2P43308 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SSR2P43308 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SSR2P43308 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.4■■□□□ 1.5
SSR2P43308 WHAMMP2-203ENST00000563942 1603 ntBASIC24.4■■□□□ 1.5
SSR2P43308 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
SSR2P43308 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SSR2P43308 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SSR2P43308 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SSR2P43308 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SSR2P43308 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.39■■□□□ 1.5
SSR2P43308 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
SSR2P43308 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.39■■□□□ 1.5
SSR2P43308 DRD5P2-201ENST00000421395 2012 ntBASIC24.39■■□□□ 1.5
SSR2P43308 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.39■■□□□ 1.49
SSR2P43308 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
SSR2P43308 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.49
SSR2P43308 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.38■■□□□ 1.49
SSR2P43308 AC100797.4-201ENST00000631653 1827 ntBASIC24.38■■□□□ 1.49
SSR2P43308 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.38■■□□□ 1.49
SSR2P43308 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SSR2P43308 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SSR2P43308 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.37■■□□□ 1.49
SSR2P43308 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
SSR2P43308 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.37■■□□□ 1.49
SSR2P43308 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.37■■□□□ 1.49
SSR2P43308 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.37■■□□□ 1.49
SSR2P43308 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.37■■□□□ 1.49
SSR2P43308 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.37■■□□□ 1.49
SSR2P43308 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SSR2P43308 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.37■■□□□ 1.49
SSR2P43308 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SSR2P43308 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SSR2P43308 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
SSR2P43308 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SSR2P43308 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SSR2P43308 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.36■■□□□ 1.49
SSR2P43308 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.36■■□□□ 1.49
SSR2P43308 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.35■■□□□ 1.49
SSR2P43308 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SSR2P43308 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.35■■□□□ 1.49
SSR2P43308 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SSR2P43308 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SSR2P43308 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.34■■□□□ 1.49
SSR2P43308 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.34■■□□□ 1.49
SSR2P43308 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.34■■□□□ 1.49
SSR2P43308 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SSR2P43308 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SSR2P43308 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SSR2P43308 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SSR2P43308 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.33■■□□□ 1.49
SSR2P43308 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
SSR2P43308 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SSR2P43308 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SSR2P43308 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
SSR2P43308 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
SSR2P43308 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SSR2P43308 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.31■■□□□ 1.48
SSR2P43308 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
SSR2P43308 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.31■■□□□ 1.48
SSR2P43308 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.31■■□□□ 1.48
SSR2P43308 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SSR2P43308 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.31■■□□□ 1.48
SSR2P43308 AC142086.6-201ENST00000621154 1765 ntBASIC24.31■■□□□ 1.48
SSR2P43308 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SSR2P43308 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.3■■□□□ 1.48
SSR2P43308 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
SSR2P43308 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SSR2P43308 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SSR2P43308 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
SSR2P43308 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.28■■□□□ 1.48
SSR2P43308 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.28■■□□□ 1.48
SSR2P43308 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SSR2P43308 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
SSR2P43308 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.27■■□□□ 1.48
SSR2P43308 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
SSR2P43308 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SSR2P43308 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.26■■□□□ 1.47
SSR2P43308 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.26■■□□□ 1.47
SSR2P43308 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SSR2P43308 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SSR2P43308 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SSR2P43308 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SSR2P43308 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms