Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 LAS17YOR181W 1902 nt7.84□□□□□ -1.15
TDP1P38319 YJL064WYJL064W 396 nt7.84□□□□□ -1.15
TDP1P38319 VBA3YCL069W 1377 nt7.84□□□□□ -1.16
TDP1P38319 PFS2YNL317W 1398 nt7.84□□□□□ -1.16
TDP1P38319 YKR012CYKR012C 378 nt7.83□□□□□ -1.16
TDP1P38319 SDS24YBR214W 1584 nt7.83□□□□□ -1.16
TDP1P38319 YJR149WYJR149W 1215 nt7.82□□□□□ -1.16
TDP1P38319 MDH2YOL126C 1134 nt7.82□□□□□ -1.16
TDP1P38319 GNP1YDR508C 1992 nt7.82□□□□□ -1.16
TDP1P38319 YIR035CYIR035C 765 nt7.81□□□□□ -1.16
TDP1P38319 BUB2YMR055C 921 nt7.81□□□□□ -1.16
TDP1P38319 REG2YBR050C 1017 nt7.81□□□□□ -1.16
TDP1P38319 YRF1-1YDR545W 5391 nt7.8□□□□□ -1.16
TDP1P38319 YRF1-5YLR467W 5391 nt7.8□□□□□ -1.16
TDP1P38319 YRF1-8YOR396W 5391 nt7.8□□□□□ -1.16
TDP1P38319 KRE1YNL322C 942 nt7.8□□□□□ -1.16
TDP1P38319 NDE2YDL085W 1638 nt7.8□□□□□ -1.16
TDP1P38319 PMT7YDR307W 1989 nt7.8□□□□□ -1.16
TDP1P38319 HSV2YGR223C 1347 nt7.79□□□□□ -1.16
TDP1P38319 TIF3YPR163C 1311 nt7.79□□□□□ -1.16
TDP1P38319 PAU19YMR325W 375 nt7.79□□□□□ -1.16
TDP1P38319 MRN1YPL184C 1839 nt7.79□□□□□ -1.16
TDP1P38319 PMA2YPL036W 2844 nt7.78□□□□□ -1.16
TDP1P38319 BUD31YCR063W 474 nt7.78□□□□□ -1.16
TDP1P38319 GLY1YEL046C 1164 nt7.78□□□□□ -1.16
TDP1P38319 YFR020WYFR020W 699 nt7.77□□□□□ -1.17
TDP1P38319 PHB2YGR231C 933 nt7.77□□□□□ -1.17
TDP1P38319 RSM7YJR113C 744 nt7.77□□□□□ -1.17
TDP1P38319 ADH3YMR083W 1128 nt7.76□□□□□ -1.17
TDP1P38319 YNL140CYNL140C 570 nt7.76□□□□□ -1.17
TDP1P38319 INO1YJL153C 1602 nt7.76□□□□□ -1.17
TDP1P38319 LRO1YNR008W 1986 nt7.76□□□□□ -1.17
TDP1P38319 FRT1YOR324C 1809 nt7.75□□□□□ -1.17
TDP1P38319 DIP5YPL265W 1827 nt7.75□□□□□ -1.17
TDP1P38319 SLM3YDL033C 1254 nt7.74□□□□□ -1.17
TDP1P38319 SLG1YOR008C 1137 nt7.74□□□□□ -1.17
TDP1P38319 TGL5YOR081C 2250 nt7.73□□□□□ -1.17
TDP1P38319 PAM17YKR065C 594 nt7.73□□□□□ -1.17
TDP1P38319 EHT1YBR177C 1356 nt7.72□□□□□ -1.17
TDP1P38319 INM1YHR046C 888 nt7.72□□□□□ -1.17
TDP1P38319 RNA170RNA170 169 nt7.72□□□□□ -1.17
TDP1P38319 NDE1YMR145C 1683 nt7.72□□□□□ -1.17
TDP1P38319 MET13YGL125W 1803 nt7.71□□□□□ -1.17
TDP1P38319 WSC4YHL028W 1818 nt7.71□□□□□ -1.17
TDP1P38319 IGD1YFR017C 588 nt7.71□□□□□ -1.18
TDP1P38319 YEL009C-AYEL009C-A 408 nt7.7□□□□□ -1.18
TDP1P38319 TDA4YJR116W 840 nt7.7□□□□□ -1.18
TDP1P38319 YPL041CYPL041C 624 nt7.7□□□□□ -1.18
TDP1P38319 ENO1YGR254W 1314 nt7.7□□□□□ -1.18
TDP1P38319 MAM3YOL060C 2121 nt7.69□□□□□ -1.18
TDP1P38319 RPL2AYFR031C-A 765 nt7.68□□□□□ -1.18
TDP1P38319 ADE2YOR128C 1716 nt7.67□□□□□ -1.18
TDP1P38319 PMT1YDL095W 2454 nt7.67□□□□□ -1.18
TDP1P38319 YEL034C-AYEL034C-A 603 nt7.66□□□□□ -1.18
TDP1P38319 GGC1YDL198C 903 nt7.65□□□□□ -1.18
TDP1P38319 ARO3YDR035W 1113 nt7.65□□□□□ -1.18
TDP1P38319 MOB1YIL106W 945 nt7.65□□□□□ -1.18
TDP1P38319 AIM34YMR003W 597 nt7.65□□□□□ -1.18
TDP1P38319 MET22YOL064C 1074 nt7.65□□□□□ -1.18
TDP1P38319 CCR4YAL021C 2514 nt7.64□□□□□ -1.19
TDP1P38319 BEM1YBR200W 1656 nt7.64□□□□□ -1.19
TDP1P38319 KTR4YBR199W 1395 nt7.64□□□□□ -1.19
TDP1P38319 ALG7YBR243C 1347 nt7.64□□□□□ -1.19
TDP1P38319 YLR460CYLR460C 1131 nt7.63□□□□□ -1.19
TDP1P38319 MRP7YNL005C 1116 nt7.63□□□□□ -1.19
TDP1P38319 SGF73YGL066W 1974 nt7.62□□□□□ -1.19
TDP1P38319 SNU66YOR308C 1764 nt7.62□□□□□ -1.19
TDP1P38319 FLX1YIL134W 936 nt7.62□□□□□ -1.19
TDP1P38319 RCF1YML030W 480 nt7.62□□□□□ -1.19
TDP1P38319 PDC6YGR087C 1692 nt7.62□□□□□ -1.19
TDP1P38319 WSC3YOL105C 1671 nt7.62□□□□□ -1.19
TDP1P38319 CTF3YLR381W 2202 nt7.62□□□□□ -1.19
TDP1P38319 ITR1YDR497C 1755 nt7.61□□□□□ -1.19
TDP1P38319 AFG2YLR397C 2343 nt7.61□□□□□ -1.19
TDP1P38319 tA(AGC)DtA(AGC)D 73 nt7.61□□□□□ -1.19
TDP1P38319 tA(AGC)FtA(AGC)F 73 nt7.61□□□□□ -1.19
TDP1P38319 tA(AGC)GtA(AGC)G 73 nt7.61□□□□□ -1.19
TDP1P38319 tA(AGC)HtA(AGC)H 73 nt7.61□□□□□ -1.19
TDP1P38319 tA(AGC)JtA(AGC)J 73 nt7.61□□□□□ -1.19
TDP1P38319 tA(AGC)K1tA(AGC)K1 73 nt7.61□□□□□ -1.19
TDP1P38319 tA(AGC)K2tA(AGC)K2 73 nt7.61□□□□□ -1.19
TDP1P38319 tA(AGC)LtA(AGC)L 73 nt7.61□□□□□ -1.19
TDP1P38319 tA(AGC)M1tA(AGC)M1 73 nt7.61□□□□□ -1.19
TDP1P38319 tA(AGC)M2tA(AGC)M2 73 nt7.61□□□□□ -1.19
TDP1P38319 tA(AGC)PtA(AGC)P 73 nt7.61□□□□□ -1.19
TDP1P38319 CHS7YHR142W 951 nt7.61□□□□□ -1.19
TDP1P38319 PRC1YMR297W 1599 nt7.61□□□□□ -1.19
TDP1P38319 MLS1YNL117W 1665 nt7.6□□□□□ -1.19
TDP1P38319 HXT9YJL219W 1704 nt7.59□□□□□ -1.19
TDP1P38319 SRP102YKL154W 735 nt7.59□□□□□ -1.19
TDP1P38319 ARA2YMR041C 1008 nt7.59□□□□□ -1.19
TDP1P38319 ELP6YMR312W 822 nt7.59□□□□□ -1.19
TDP1P38319 TPO1YLL028W 1761 nt7.59□□□□□ -1.2
TDP1P38319 YLR280CYLR280C 351 nt7.58□□□□□ -1.2
TDP1P38319 OLA1YBR025C 1185 nt7.58□□□□□ -1.2
TDP1P38319 YPL264CYPL264C 1062 nt7.58□□□□□ -1.2
TDP1P38319 TOP3YLR234W 1971 nt7.57□□□□□ -1.2
TDP1P38319 HXT8YJL214W 1710 nt7.56□□□□□ -1.2
TDP1P38319 OCH1YGL038C 1443 nt7.56□□□□□ -1.2
TDP1P38319 IPL1YPL209C 1104 nt7.56□□□□□ -1.2
Retrieved 100 of 7,029 protein–RNA pairs in 29.9 ms