Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNCAP37840 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SNCAP37840 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNCAP37840 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNCAP37840 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.83■□□□□ 0.93
SNCAP37840 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SNCAP37840 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SNCAP37840 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.83■□□□□ 0.92
SNCAP37840 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.83■□□□□ 0.92
SNCAP37840 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNCAP37840 RARRES2P7-201ENST00000567349 469 ntBASIC20.82■□□□□ 0.92
SNCAP37840 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SNCAP37840 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNCAP37840 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SNCAP37840 AL449106.1-201ENST00000608517 1980 ntBASIC20.81■□□□□ 0.92
SNCAP37840 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNCAP37840 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNCAP37840 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNCAP37840 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.81■□□□□ 0.92
SNCAP37840 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNCAP37840 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SNCAP37840 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNCAP37840 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNCAP37840 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SNCAP37840 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNCAP37840 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SNCAP37840 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNCAP37840 AC010864.1-201ENST00000609407 1511 ntBASIC20.78■□□□□ 0.92
SNCAP37840 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNCAP37840 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNCAP37840 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNCAP37840 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNCAP37840 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNCAP37840 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.78■□□□□ 0.92
SNCAP37840 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNCAP37840 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNCAP37840 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNCAP37840 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SNCAP37840 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SNCAP37840 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNCAP37840 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNCAP37840 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNCAP37840 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNCAP37840 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.76■□□□□ 0.91
SNCAP37840 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNCAP37840 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.76■□□□□ 0.91
SNCAP37840 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SNCAP37840 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
SNCAP37840 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNCAP37840 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.75■□□□□ 0.91
SNCAP37840 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.75■□□□□ 0.91
SNCAP37840 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.75■□□□□ 0.91
SNCAP37840 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNCAP37840 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNCAP37840 SETD8P1-201ENST00000623146 1180 ntBASIC20.74■□□□□ 0.91
SNCAP37840 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.73■□□□□ 0.91
SNCAP37840 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNCAP37840 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNCAP37840 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNCAP37840 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNCAP37840 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.73■□□□□ 0.91
SNCAP37840 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SNCAP37840 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SNCAP37840 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNCAP37840 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.72■□□□□ 0.91
SNCAP37840 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNCAP37840 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNCAP37840 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.71■□□□□ 0.91
SNCAP37840 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.71■□□□□ 0.91
SNCAP37840 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNCAP37840 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNCAP37840 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNCAP37840 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.7■□□□□ 0.9
SNCAP37840 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.7■□□□□ 0.9
SNCAP37840 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SNCAP37840 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNCAP37840 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNCAP37840 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNCAP37840 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
SNCAP37840 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNCAP37840 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SNCAP37840 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNCAP37840 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNCAP37840 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
SNCAP37840 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNCAP37840 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SNCAP37840 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SNCAP37840 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNCAP37840 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNCAP37840 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.67■□□□□ 0.9
SNCAP37840 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNCAP37840 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.67■□□□□ 0.9
SNCAP37840 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNCAP37840 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNCAP37840 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNCAP37840 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNCAP37840 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNCAP37840 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.66■□□□□ 0.9
SNCAP37840 BX255925.1-201ENST00000566954 1854 ntBASIC20.65■□□□□ 0.9
SNCAP37840 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms