Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB4AP20338 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RAB4AP20338 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB4AP20338 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB4AP20338 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.46■□□□□ 0.71
RAB4AP20338 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB4AP20338 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB4AP20338 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RAB4AP20338 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RAB4AP20338 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB4AP20338 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB4AP20338 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB4AP20338 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB4AP20338 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB4AP20338 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB4AP20338 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB4AP20338 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB4AP20338 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB4AP20338 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB4AP20338 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB4AP20338 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB4AP20338 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB4AP20338 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB4AP20338 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB4AP20338 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB4AP20338 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB4AP20338 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB4AP20338 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB4AP20338 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB4AP20338 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB4AP20338 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB4AP20338 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB4AP20338 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB4AP20338 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB4AP20338 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB4AP20338 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB4AP20338 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB4AP20338 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RAB4AP20338 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RAB4AP20338 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RAB4AP20338 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB4AP20338 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RAB4AP20338 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RAB4AP20338 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB4AP20338 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB4AP20338 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB4AP20338 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB4AP20338 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB4AP20338 LINC00543-201ENST00000567234 1845 ntBASIC19.37■□□□□ 0.69
RAB4AP20338 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB4AP20338 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB4AP20338 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB4AP20338 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RAB4AP20338 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB4AP20338 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB4AP20338 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RAB4AP20338 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RAB4AP20338 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB4AP20338 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB4AP20338 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RAB4AP20338 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB4AP20338 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB4AP20338 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB4AP20338 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB4AP20338 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RAB4AP20338 AL135925.1-201ENST00000605920 1701 ntBASIC19.33■□□□□ 0.68
RAB4AP20338 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB4AP20338 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RAB4AP20338 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB4AP20338 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB4AP20338 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RAB4AP20338 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB4AP20338 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB4AP20338 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB4AP20338 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB4AP20338 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB4AP20338 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB4AP20338 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
RAB4AP20338 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RAB4AP20338 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB4AP20338 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB4AP20338 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB4AP20338 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB4AP20338 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RAB4AP20338 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RAB4AP20338 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RAB4AP20338 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB4AP20338 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB4AP20338 AC093323.1-202ENST00000635031 2045 ntBASIC19.27■□□□□ 0.67
RAB4AP20338 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB4AP20338 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB4AP20338 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RAB4AP20338 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RAB4AP20338 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RAB4AP20338 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB4AP20338 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.26■□□□□ 0.67
RAB4AP20338 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB4AP20338 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB4AP20338 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB4AP20338 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms