Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
ALDH1A1P00352 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ALDH1A1P00352 GUK1-208ENST00000366728 842 ntTSL 2 BASIC30.09■■■□□ 2.41
ALDH1A1P00352 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ALDH1A1P00352 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ALDH1A1P00352 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
ALDH1A1P00352 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.09■■■□□ 2.41
ALDH1A1P00352 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC30.09■■■□□ 2.41
ALDH1A1P00352 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ALDH1A1P00352 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.08■■■□□ 2.41
ALDH1A1P00352 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
ALDH1A1P00352 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
ALDH1A1P00352 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
ALDH1A1P00352 AC148477.6-201ENST00000623746 465 ntBASIC30.06■■■□□ 2.4
ALDH1A1P00352 AC120057.4-201ENST00000624722 1615 ntBASIC30.06■■■□□ 2.4
ALDH1A1P00352 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.05■■■□□ 2.4
ALDH1A1P00352 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.05■■■□□ 2.4
ALDH1A1P00352 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ALDH1A1P00352 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
ALDH1A1P00352 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ALDH1A1P00352 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
ALDH1A1P00352 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
ALDH1A1P00352 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.02■■■□□ 2.4
ALDH1A1P00352 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
ALDH1A1P00352 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
ALDH1A1P00352 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
ALDH1A1P00352 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
ALDH1A1P00352 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC30■■■□□ 2.39
ALDH1A1P00352 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ALDH1A1P00352 AC092296.2-201ENST00000589470 999 ntBASIC29.99■■■□□ 2.39
ALDH1A1P00352 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC29.99■■■□□ 2.39
ALDH1A1P00352 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.98■■■□□ 2.39
ALDH1A1P00352 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
ALDH1A1P00352 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
ALDH1A1P00352 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
ALDH1A1P00352 AC010864.1-201ENST00000609407 1511 ntBASIC29.97■■■□□ 2.39
ALDH1A1P00352 ECEL1P2-201ENST00000461596 1295 ntBASIC29.96■■■□□ 2.39
ALDH1A1P00352 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
ALDH1A1P00352 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.95■■■□□ 2.39
ALDH1A1P00352 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC29.95■■■□□ 2.39
ALDH1A1P00352 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
ALDH1A1P00352 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.94■■■□□ 2.38
ALDH1A1P00352 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
ALDH1A1P00352 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
ALDH1A1P00352 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
ALDH1A1P00352 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.93■■■□□ 2.38
ALDH1A1P00352 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
ALDH1A1P00352 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
ALDH1A1P00352 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC29.93■■■□□ 2.38
ALDH1A1P00352 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
ALDH1A1P00352 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
ALDH1A1P00352 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
ALDH1A1P00352 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC29.91■■■□□ 2.38
ALDH1A1P00352 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
ALDH1A1P00352 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
ALDH1A1P00352 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.89■■■□□ 2.38
ALDH1A1P00352 HES4-204ENST00000484667 667 ntTSL 3 BASIC29.89■■■□□ 2.38
ALDH1A1P00352 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC29.89■■■□□ 2.38
ALDH1A1P00352 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
ALDH1A1P00352 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
ALDH1A1P00352 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC29.88■■■□□ 2.37
ALDH1A1P00352 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
ALDH1A1P00352 AC135983.2-203ENST00000454486 1613 ntBASIC29.88■■■□□ 2.37
ALDH1A1P00352 AC110285.7-201ENST00000624417 1536 ntBASIC29.87■■■□□ 2.37
ALDH1A1P00352 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.87■■■□□ 2.37
ALDH1A1P00352 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC29.87■■■□□ 2.37
ALDH1A1P00352 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC29.87■■■□□ 2.37
ALDH1A1P00352 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
ALDH1A1P00352 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
ALDH1A1P00352 WHAMMP2-203ENST00000563942 1603 ntBASIC29.85■■■□□ 2.37
ALDH1A1P00352 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.85■■■□□ 2.37
ALDH1A1P00352 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC29.85■■■□□ 2.37
ALDH1A1P00352 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
ALDH1A1P00352 AL035685.1-201ENST00000636663 812 ntBASIC29.85■■■□□ 2.37
ALDH1A1P00352 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ALDH1A1P00352 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.84■■■□□ 2.37
ALDH1A1P00352 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ALDH1A1P00352 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ALDH1A1P00352 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.83■■■□□ 2.37
ALDH1A1P00352 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
ALDH1A1P00352 MIR219A2-201ENST00000608502 1504 ntBASIC29.83■■■□□ 2.37
ALDH1A1P00352 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
ALDH1A1P00352 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC29.83■■■□□ 2.37
ALDH1A1P00352 AL161658.1-201ENST00000623641 1967 ntBASIC29.83■■■□□ 2.37
ALDH1A1P00352 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.82■■■□□ 2.37
ALDH1A1P00352 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
ALDH1A1P00352 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.82■■■□□ 2.36
ALDH1A1P00352 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC29.81■■■□□ 2.36
ALDH1A1P00352 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
ALDH1A1P00352 AC126177.7-201ENST00000547904 679 ntBASIC29.81■■■□□ 2.36
ALDH1A1P00352 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
ALDH1A1P00352 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC29.79■■■□□ 2.36
ALDH1A1P00352 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
ALDH1A1P00352 TRIR-205ENST00000592273 783 ntTSL 3 BASIC29.78■■■□□ 2.36
ALDH1A1P00352 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
ALDH1A1P00352 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
ALDH1A1P00352 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.77■■■□□ 2.36
ALDH1A1P00352 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
ALDH1A1P00352 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC29.77■■■□□ 2.36
ALDH1A1P00352 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms