Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SPDEFO95238 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SPDEFO95238 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SPDEFO95238 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SPDEFO95238 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.47■■□□□ 1.03
SPDEFO95238 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.46■■□□□ 1.03
SPDEFO95238 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SPDEFO95238 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SPDEFO95238 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SPDEFO95238 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SPDEFO95238 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SPDEFO95238 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SPDEFO95238 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPDEFO95238 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
SPDEFO95238 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPDEFO95238 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPDEFO95238 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPDEFO95238 AL139393.2-201ENST00000608721 2025 ntBASIC21.43■■□□□ 1.02
SPDEFO95238 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPDEFO95238 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.43■■□□□ 1.02
SPDEFO95238 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
SPDEFO95238 AL135925.1-201ENST00000605920 1701 ntBASIC21.43■■□□□ 1.02
SPDEFO95238 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.43■■□□□ 1.02
SPDEFO95238 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SPDEFO95238 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SPDEFO95238 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
SPDEFO95238 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.42■■□□□ 1.02
SPDEFO95238 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPDEFO95238 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.42■■□□□ 1.02
SPDEFO95238 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SPDEFO95238 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SPDEFO95238 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SPDEFO95238 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SPDEFO95238 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.41■■□□□ 1.02
SPDEFO95238 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SPDEFO95238 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SPDEFO95238 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SPDEFO95238 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SPDEFO95238 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SPDEFO95238 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SPDEFO95238 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.38■■□□□ 1.01
SPDEFO95238 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.38■■□□□ 1.01
SPDEFO95238 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SPDEFO95238 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.38■■□□□ 1.01
SPDEFO95238 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.38■■□□□ 1.01
SPDEFO95238 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPDEFO95238 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SPDEFO95238 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.37■■□□□ 1.01
SPDEFO95238 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPDEFO95238 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPDEFO95238 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPDEFO95238 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
SPDEFO95238 AC097358.2-201ENST00000607541 1159 ntBASIC21.36■■□□□ 1.01
SPDEFO95238 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPDEFO95238 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPDEFO95238 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.35■■□□□ 1.01
SPDEFO95238 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SPDEFO95238 AC136428.2-201ENST00000563187 214 ntBASIC21.35■■□□□ 1.01
SPDEFO95238 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SPDEFO95238 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SPDEFO95238 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPDEFO95238 AL391121.1-201ENST00000607967 1349 ntBASIC21.34■■□□□ 1.01
SPDEFO95238 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPDEFO95238 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SPDEFO95238 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPDEFO95238 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SPDEFO95238 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SPDEFO95238 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SPDEFO95238 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.33■■□□□ 1
SPDEFO95238 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.32■■□□□ 1
SPDEFO95238 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SPDEFO95238 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SPDEFO95238 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SPDEFO95238 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.31■■□□□ 1
SPDEFO95238 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.31■■□□□ 1
SPDEFO95238 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPDEFO95238 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SPDEFO95238 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPDEFO95238 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SPDEFO95238 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.29■■□□□ 1
SPDEFO95238 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SPDEFO95238 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SPDEFO95238 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SPDEFO95238 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.29■■□□□ 1
SPDEFO95238 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SPDEFO95238 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SPDEFO95238 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SPDEFO95238 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPDEFO95238 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.27■■□□□ 1
SPDEFO95238 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPDEFO95238 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.27■■□□□ 1
SPDEFO95238 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.27■■□□□ 1
SPDEFO95238 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SPDEFO95238 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPDEFO95238 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPDEFO95238 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.27■■□□□ 1
SPDEFO95238 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPDEFO95238 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.27■■□□□ 1
SPDEFO95238 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SPDEFO95238 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms