Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
RPP40O75818 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RPP40O75818 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RPP40O75818 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
RPP40O75818 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RPP40O75818 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
RPP40O75818 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
RPP40O75818 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RPP40O75818 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RPP40O75818 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RPP40O75818 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RPP40O75818 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.41■■□□□ 1.82
RPP40O75818 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RPP40O75818 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.4■■□□□ 1.82
RPP40O75818 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RPP40O75818 GPX1-201ENST00000419349 1106 ntBASIC26.4■■□□□ 1.82
RPP40O75818 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.4■■□□□ 1.82
RPP40O75818 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RPP40O75818 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RPP40O75818 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.39■■□□□ 1.82
RPP40O75818 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RPP40O75818 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
RPP40O75818 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
RPP40O75818 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
RPP40O75818 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
RPP40O75818 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPP40O75818 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPP40O75818 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPP40O75818 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.38■■□□□ 1.81
RPP40O75818 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
RPP40O75818 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPP40O75818 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.37■■□□□ 1.81
RPP40O75818 AC010864.1-201ENST00000609407 1511 ntBASIC26.37■■□□□ 1.81
RPP40O75818 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPP40O75818 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.37■■□□□ 1.81
RPP40O75818 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RPP40O75818 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
RPP40O75818 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RPP40O75818 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
RPP40O75818 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RPP40O75818 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.35■■□□□ 1.81
RPP40O75818 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RPP40O75818 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.35■■□□□ 1.81
RPP40O75818 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RPP40O75818 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
RPP40O75818 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RPP40O75818 ABCB10P3-201ENST00000561950 2166 ntBASIC26.34■■□□□ 1.81
RPP40O75818 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.34■■□□□ 1.81
RPP40O75818 RNF126P1-201ENST00000567452 1320 ntBASIC26.34■■□□□ 1.81
RPP40O75818 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RPP40O75818 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RPP40O75818 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RPP40O75818 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.32■■□□□ 1.8
RPP40O75818 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
RPP40O75818 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RPP40O75818 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.31■■□□□ 1.8
RPP40O75818 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.3■■□□□ 1.8
RPP40O75818 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPP40O75818 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RPP40O75818 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
RPP40O75818 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPP40O75818 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.29■■□□□ 1.8
RPP40O75818 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
RPP40O75818 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
RPP40O75818 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPP40O75818 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RPP40O75818 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.28■■□□□ 1.8
RPP40O75818 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.28■■□□□ 1.8
RPP40O75818 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
RPP40O75818 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPP40O75818 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
RPP40O75818 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.27■■□□□ 1.8
RPP40O75818 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RPP40O75818 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.27■■□□□ 1.8
RPP40O75818 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.27■■□□□ 1.8
RPP40O75818 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RPP40O75818 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RPP40O75818 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
RPP40O75818 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
RPP40O75818 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RPP40O75818 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RPP40O75818 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.24■■□□□ 1.79
RPP40O75818 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RPP40O75818 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RPP40O75818 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RPP40O75818 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RPP40O75818 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RPP40O75818 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
RPP40O75818 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
RPP40O75818 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.23■■□□□ 1.79
RPP40O75818 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RPP40O75818 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RPP40O75818 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RPP40O75818 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RPP40O75818 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
RPP40O75818 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
RPP40O75818 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
RPP40O75818 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RPP40O75818 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
RPP40O75818 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms