Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 AC020928.2-201ENST00000588717 2197 ntBASIC19.41■□□□□ 0.7
TRAV9-1A0A075B6T8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV9-1A0A075B6T8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV9-1A0A075B6T8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV9-1A0A075B6T8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV9-1A0A075B6T8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV9-1A0A075B6T8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV9-1A0A075B6T8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAV9-1A0A075B6T8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV9-1A0A075B6T8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRAV9-1A0A075B6T8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV9-1A0A075B6T8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV9-1A0A075B6T8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
TRAV9-1A0A075B6T8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV9-1A0A075B6T8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV9-1A0A075B6T8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAV9-1A0A075B6T8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV9-1A0A075B6T8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV9-1A0A075B6T8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV9-1A0A075B6T8 LINC01003-201ENST00000564834 1764 ntBASIC19.36■□□□□ 0.69
TRAV9-1A0A075B6T8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAV9-1A0A075B6T8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV9-1A0A075B6T8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV9-1A0A075B6T8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAV9-1A0A075B6T8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV9-1A0A075B6T8 AC145676.1-201ENST00000514988 2004 ntBASIC19.35■□□□□ 0.69
TRAV9-1A0A075B6T8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV9-1A0A075B6T8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV9-1A0A075B6T8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TRAV9-1A0A075B6T8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV9-1A0A075B6T8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV9-1A0A075B6T8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.34■□□□□ 0.69
TRAV9-1A0A075B6T8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV9-1A0A075B6T8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV9-1A0A075B6T8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV9-1A0A075B6T8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRAV9-1A0A075B6T8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV9-1A0A075B6T8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
TRAV9-1A0A075B6T8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
TRAV9-1A0A075B6T8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV9-1A0A075B6T8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TRAV9-1A0A075B6T8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV9-1A0A075B6T8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV9-1A0A075B6T8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.32■□□□□ 0.68
TRAV9-1A0A075B6T8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRAV9-1A0A075B6T8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV9-1A0A075B6T8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV9-1A0A075B6T8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV9-1A0A075B6T8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV9-1A0A075B6T8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV9-1A0A075B6T8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV9-1A0A075B6T8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.31■□□□□ 0.68
TRAV9-1A0A075B6T8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV9-1A0A075B6T8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV9-1A0A075B6T8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV9-1A0A075B6T8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV9-1A0A075B6T8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV9-1A0A075B6T8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV9-1A0A075B6T8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV9-1A0A075B6T8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TRAV9-1A0A075B6T8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV9-1A0A075B6T8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV9-1A0A075B6T8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV9-1A0A075B6T8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV9-1A0A075B6T8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV9-1A0A075B6T8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV9-1A0A075B6T8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV9-1A0A075B6T8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV9-1A0A075B6T8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRAV9-1A0A075B6T8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV9-1A0A075B6T8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV9-1A0A075B6T8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV9-1A0A075B6T8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV9-1A0A075B6T8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRAV9-1A0A075B6T8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV9-1A0A075B6T8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV9-1A0A075B6T8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV9-1A0A075B6T8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV9-1A0A075B6T8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
TRAV9-1A0A075B6T8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV9-1A0A075B6T8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV9-1A0A075B6T8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV9-1A0A075B6T8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRAV9-1A0A075B6T8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV9-1A0A075B6T8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRAV9-1A0A075B6T8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV9-1A0A075B6T8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV9-1A0A075B6T8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
TRAV9-1A0A075B6T8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV9-1A0A075B6T8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRAV9-1A0A075B6T8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV9-1A0A075B6T8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV9-1A0A075B6T8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV9-1A0A075B6T8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV9-1A0A075B6T8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV9-1A0A075B6T8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV9-1A0A075B6T8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV9-1A0A075B6T8 AP004833.2-201ENST00000532228 1454 ntBASIC19.2■□□□□ 0.66
TRAV9-1A0A075B6T8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV9-1A0A075B6T8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms