Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 PABPC1P6-201ENST00000445594 1829 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 DDX18P3-201ENST00000404856 2007 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 PANDAR-201ENST00000629595 1506 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 CASC19-221ENST00000641309 1382 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 ZNF733P-202ENST00000444809 1573 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 LINC01109-201ENST00000603837 3081 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 RN7SKP247-201ENST00000411094 308 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AL590609.2-201ENST00000421430 368 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC006065.1-201ENST00000422539 802 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC092013.1-201ENST00000438795 332 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AL157827.1-201ENST00000447622 132 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 RPL5P13-201ENST00000462840 709 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC009127.1-201ENST00000467090 155 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC079841.1-201ENST00000481228 950 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 NPM1P29-201ENST00000483112 803 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC069304.1-201ENST00000491593 704 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC005412.2-201ENST00000492004 341 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC072052.1-201ENST00000496556 306 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 HIGD1AP14-201ENST00000507617 282 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 RNU6-513P-201ENST00000516104 104 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AP006245.2-201ENST00000522004 300 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC125612.1-201ENST00000547580 377 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC015908.5-201ENST00000623289 343 ntBASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CHRNA9Q9UGM1 AC104118.1-201ENST00000607625 1589 ntBASIC4.65□□□□□ -1.66
CHRNA9Q9UGM1 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHRNA9Q9UGM1 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.65□□□□□ -1.66
CHRNA9Q9UGM1 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CHRNA9Q9UGM1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHRNA9Q9UGM1 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHRNA9Q9UGM1 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.65□□□□□ -1.66
CHRNA9Q9UGM1 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CHRNA9Q9UGM1 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.65□□□□□ -1.66
CHRNA9Q9UGM1 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CHRNA9Q9UGM1 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CHRNA9Q9UGM1 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.65□□□□□ -1.66
CHRNA9Q9UGM1 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 RN7SKP113-201ENST00000363891 295 ntBASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 AC093719.1-202ENST00000392735 373 ntBASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 AL035079.1-201ENST00000405210 287 ntBASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 AL512430.2-201ENST00000406786 339 ntBASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 AMZ2P2-201ENST00000406819 1057 ntBASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 RN7SKP229-201ENST00000410465 302 ntBASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 RNA5SP498-201ENST00000411342 120 ntBASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 RPL6P29-201ENST00000414863 865 ntBASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 AL356806.1-201ENST00000422524 916 ntBASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 AL355433.1-201ENST00000422804 300 ntBASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.65□□□□□ -1.67
CHRNA9Q9UGM1 AC012512.1-201ENST00000446594 718 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms