Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 RBMY2QP-201ENST00000429799 1147 ntBASIC5.37□□□□□ -1.55
UBE4BO95155 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.37□□□□□ -1.55
UBE4BO95155 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.37□□□□□ -1.55
UBE4BO95155 OTX2P1-201ENST00000450956 354 ntBASIC5.37□□□□□ -1.55
UBE4BO95155 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.37□□□□□ -1.55
UBE4BO95155 AC020890.1-201ENST00000491837 504 ntBASIC5.37□□□□□ -1.55
UBE4BO95155 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.37□□□□□ -1.55
UBE4BO95155 HMGB3P16-201ENST00000508037 287 ntBASIC5.37□□□□□ -1.55
UBE4BO95155 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.37□□□□□ -1.55
UBE4BO95155 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.37□□□□□ -1.55
UBE4BO95155 SNORA74C-1-201ENST00000580726 201 ntBASIC5.37□□□□□ -1.55
UBE4BO95155 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.37□□□□□ -1.55
UBE4BO95155 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UBE4BO95155 INTS6P1-201ENST00000504674 2530 ntBASIC5.37□□□□□ -1.55
UBE4BO95155 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
UBE4BO95155 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UBE4BO95155 AC099654.2-201ENST00000433031 1980 ntBASIC5.37□□□□□ -1.55
UBE4BO95155 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
UBE4BO95155 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UBE4BO95155 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBE4BO95155 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.36□□□□□ -1.55
UBE4BO95155 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.36□□□□□ -1.55
UBE4BO95155 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.36□□□□□ -1.55
UBE4BO95155 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBE4BO95155 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBE4BO95155 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBE4BO95155 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBE4BO95155 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
UBE4BO95155 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.36□□□□□ -1.55
UBE4BO95155 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
UBE4BO95155 RN7SKP104-201ENST00000362605 328 ntBASIC5.36□□□□□ -1.55
UBE4BO95155 RNU6-1263P-201ENST00000384601 106 ntBASIC5.36□□□□□ -1.55
UBE4BO95155 CHEK2P3-201ENST00000416118 248 ntBASIC5.36□□□□□ -1.55
UBE4BO95155 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.36□□□□□ -1.55
UBE4BO95155 CKS1BP6-201ENST00000424932 240 ntBASIC5.36□□□□□ -1.55
UBE4BO95155 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBE4BO95155 AC091685.2-201ENST00000454924 864 ntBASIC5.36□□□□□ -1.55
UBE4BO95155 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
UBE4BO95155 RN7SL808P-201ENST00000496066 299 ntBASIC5.36□□□□□ -1.55
UBE4BO95155 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.36□□□□□ -1.55
UBE4BO95155 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.36□□□□□ -1.55
UBE4BO95155 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.36□□□□□ -1.55
UBE4BO95155 RNA5SP249-201ENST00000516127 99 ntBASIC5.36□□□□□ -1.55
UBE4BO95155 FTH1P11-201ENST00000517577 551 ntBASIC5.36□□□□□ -1.55
UBE4BO95155 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UBE4BO95155 AL358913.1-201ENST00000554342 121 ntBASIC5.36□□□□□ -1.55
UBE4BO95155 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.36□□□□□ -1.55
UBE4BO95155 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.36□□□□□ -1.55
UBE4BO95155 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.36□□□□□ -1.55
UBE4BO95155 AC138473.1-201ENST00000605717 526 ntBASIC5.36□□□□□ -1.55
UBE4BO95155 AL445222.1-201ENST00000607259 628 ntBASIC5.36□□□□□ -1.55
UBE4BO95155 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.36□□□□□ -1.55
UBE4BO95155 AC107905.1-201ENST00000616204 426 ntBASIC5.36□□□□□ -1.55
UBE4BO95155 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBE4BO95155 AC012414.7-202ENST00000622705 1090 ntBASIC5.36□□□□□ -1.55
UBE4BO95155 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
UBE4BO95155 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UBE4BO95155 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.36□□□□□ -1.55
UBE4BO95155 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBE4BO95155 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
UBE4BO95155 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.36□□□□□ -1.55
UBE4BO95155 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.36□□□□□ -1.55
UBE4BO95155 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBE4BO95155 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBE4BO95155 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBE4BO95155 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.36□□□□□ -1.55
UBE4BO95155 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.35□□□□□ -1.55
UBE4BO95155 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBE4BO95155 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
UBE4BO95155 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
UBE4BO95155 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBE4BO95155 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.35□□□□□ -1.55
UBE4BO95155 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.35□□□□□ -1.55
UBE4BO95155 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.35□□□□□ -1.55
UBE4BO95155 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.35□□□□□ -1.55
UBE4BO95155 RPL12P3-201ENST00000440080 396 ntBASIC5.35□□□□□ -1.55
UBE4BO95155 RPL21P133-201ENST00000443666 476 ntBASIC5.35□□□□□ -1.55
UBE4BO95155 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.35□□□□□ -1.55
UBE4BO95155 RHEBP2-201ENST00000450289 600 ntBASIC5.35□□□□□ -1.55
UBE4BO95155 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.35□□□□□ -1.55
UBE4BO95155 AC004453.1-201ENST00000487895 408 ntBASIC5.35□□□□□ -1.55
UBE4BO95155 RN7SL558P-201ENST00000497468 299 ntBASIC5.35□□□□□ -1.55
UBE4BO95155 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.35□□□□□ -1.55
UBE4BO95155 GAPDHP56-201ENST00000506031 988 ntBASIC5.35□□□□□ -1.55
UBE4BO95155 AC147055.1-201ENST00000509261 750 ntBASIC5.35□□□□□ -1.55
UBE4BO95155 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.35□□□□□ -1.55
UBE4BO95155 RNU6-709P-201ENST00000517257 104 ntBASIC5.35□□□□□ -1.55
UBE4BO95155 AP000676.2-201ENST00000529711 301 ntBASIC5.35□□□□□ -1.55
UBE4BO95155 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.35□□□□□ -1.55
UBE4BO95155 LSM3P2-201ENST00000551246 273 ntBASIC5.35□□□□□ -1.55
UBE4BO95155 AL049839.1-201ENST00000556151 657 ntBASIC5.35□□□□□ -1.55
UBE4BO95155 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.35□□□□□ -1.55
UBE4BO95155 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.35□□□□□ -1.55
UBE4BO95155 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.35□□□□□ -1.55
UBE4BO95155 AC020910.3-201ENST00000603701 874 ntBASIC5.35□□□□□ -1.55
UBE4BO95155 Mico1.1-201ENST00000611698 204 ntBASIC5.35□□□□□ -1.55
UBE4BO95155 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
UBE4BO95155 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
UBE4BO95155 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.35□□□□□ -1.55
UBE4BO95155 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms