Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF144AP50876 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF144AP50876 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
RNF144AP50876 AC006116.1-201ENST00000587908 2171 ntBASIC6.88□□□□□ -1.31
RNF144AP50876 SAMMSON-203ENST00000641005 2168 ntBASIC6.88□□□□□ -1.31
RNF144AP50876 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF144AP50876 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF144AP50876 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF144AP50876 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF144AP50876 DLD-205ENST00000440410 1993 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF144AP50876 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF144AP50876 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
RNF144AP50876 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF144AP50876 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 ANKRD26P2-201ENST00000445530 1710 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 ANKRD62P1-201ENST00000434304 1623 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
RNF144AP50876 RBPJP7-201ENST00000442803 1447 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 RBPJP5-201ENST00000449433 1447 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 OR11H5P-202ENST00000641612 1325 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF144AP50876 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
RNF144AP50876 RNU6-1120P-201ENST00000362988 108 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 RNU6-777P-201ENST00000364265 104 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 RNU6-1158P-201ENST00000391167 107 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 MRPL42P2-201ENST00000403169 426 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF144AP50876 RN7SKP225-201ENST00000410405 352 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 Y_RNA.618-201ENST00000410949 107 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.87□□□□□ -1.31
RNF144AP50876 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC6.87□□□□□ -1.31
RNF144AP50876 OR3B1P-201ENST00000437536 893 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC6.87□□□□□ -1.31
RNF144AP50876 CXCR2P1-202ENST00000443392 1074 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 ATP5G1P6-201ENST00000451206 412 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 MRPS21P1-201ENST00000453850 223 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 MTND4P17-201ENST00000470444 350 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 AC084878.1-201ENST00000480555 648 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC6.87□□□□□ -1.31
RNF144AP50876 AC073610.1-201ENST00000489971 396 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 AC127024.1-201ENST00000490847 418 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 AC117383.2-201ENST00000514722 322 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 RNU6-559P-201ENST00000516151 98 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 SNORA40.12-201ENST00000516329 111 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 RNU6-1003P-201ENST00000517099 105 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 OR7E87P-201ENST00000532397 929 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
RNF144AP50876 AC093519.1-201ENST00000566109 298 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 MIR3689C-201ENST00000581239 72 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.87□□□□□ -1.31
RNF144AP50876 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 AC104785.1-201ENST00000603220 588 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 AL390058.1-201ENST00000603834 629 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 AL021918.1-201ENST00000603933 236 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 AP001330.4-201ENST00000604350 154 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF144AP50876 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF144AP50876 MTND4LP32-201ENST00000636111 270 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
RNF144AP50876 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF144AP50876 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
RNF144AP50876 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF144AP50876 HSPA8P11-201ENST00000508840 1898 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF144AP50876 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF144AP50876 AC092447.10-201ENST00000620607 1652 ntBASIC6.87□□□□□ -1.31
RNF144AP50876 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF144AP50876 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF144AP50876 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
RNF144AP50876 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 AC005614.1-201ENST00000598952 3653 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
RNF144AP50876 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF144AP50876 RBMX2P2-201ENST00000257020 946 ntBASIC6.86□□□□□ -1.31
RNF144AP50876 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms