RNA–Protein interactions for RNA: ENST00000516151.1

RNU6-559P-201, Transcript of RNA, U6 small nuclear 559, pseudogene, humanhuman

BASIC

Gene RNU6-559P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-559P-201ENST00000516151 AEBP2Q6ZN18 517 aaPredicted RBP20.43■□□□□ 0.86
RNU6-559P-201ENST00000516151 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
RNU6-559P-201ENST00000516151 SENP3Q9H4L4 574 aaPredicted RBP17.45■□□□□ 0.38
RNU6-559P-201ENST00000516151 PHF23Q9BUL5 403 aaPredicted RBP17.2■□□□□ 0.34
RNU6-559P-201ENST00000516151 FOXD1Q16676 465 aa16.21■□□□□ 0.19
RNU6-559P-201ENST00000516151 PLPPR3Q6T4P5 718 aa15.68■□□□□ 0.1
RNU6-559P-201ENST00000516151 PPP6R1Q9UPN7 881 aa15.22■□□□□ 0.03
RNU6-559P-201ENST00000516151 ADRA2BP18089 450 aa15.18■□□□□ 0.02
RNU6-559P-201ENST00000516151 PIAS4Q8N2W9 510 aaPredicted RBP15.18■□□□□ 0.02
RNU6-559P-201ENST00000516151 MSH5O43196 834 aa15.17■□□□□ 0.02
RNU6-559P-201ENST00000516151 POTEDQ86YR6 584 aa14.57□□□□□ -0.08
RNU6-559P-201ENST00000516151 SCAF1Q9H7N4 1312 aaKnown RBP13.94□□□□□ -0.18
RNU6-559P-201ENST00000516151 MAPK8IP2Q13387 824 aaPredicted RBP13.89□□□□□ -0.19
RNU6-559P-201ENST00000516151 DMRT2Q9Y5R5 561 aa13.86□□□□□ -0.19
RNU6-559P-201ENST00000516151 PPP4R3CPQ6ZMV5 832 aa13.73□□□□□ -0.21
RNU6-559P-201ENST00000516151 CNKSR2Q8WXI2 1034 aa13.48□□□□□ -0.25
RNU6-559P-201ENST00000516151 HOXD11P31277 338 aaPredicted RBP13.4□□□□□ -0.26
RNU6-559P-201ENST00000516151 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
RNU6-559P-201ENST00000516151 NCBP3Q53F19 620 aaKnown RBP13.27□□□□□ -0.29
RNU6-559P-201ENST00000516151 DCAF8L1A6NGE4 600 aa13.2□□□□□ -0.3
RNU6-559P-201ENST00000516151 NPM3O75607 178 aaKnown RBP13.05□□□□□ -0.32
RNU6-559P-201ENST00000516151 DNAJC5BQ9UF47 199 aa12.98□□□□□ -0.33
RNU6-559P-201ENST00000516151 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
RNU6-559P-201ENST00000516151 CACNB1Q02641 598 aaPredicted RBP12.9□□□□□ -0.34
RNU6-559P-201ENST00000516151 KCNA4P22459 653 aa12.89□□□□□ -0.35
RNU6-559P-201ENST00000516151 C1QBPQ07021 282 aaKnown RBP12.77□□□□□ -0.37
RNU6-559P-201ENST00000516151 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.72□□□□□ -0.37
RNU6-559P-201ENST00000516151 U3KPZ7 1027 aaPredicted RBP12.49□□□□□ -0.41
RNU6-559P-201ENST00000516151 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
RNU6-559P-201ENST00000516151 SPINK5Q9NQ38 1064 aaPredicted RBP12.24□□□□□ -0.45
RNU6-559P-201ENST00000516151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.21□□□□□ -0.45
RNU6-559P-201ENST00000516151 CAPN15O75808 1086 aa12.21□□□□□ -0.45
RNU6-559P-201ENST00000516151 APLP2Q06481 763 aa12.21□□□□□ -0.45
RNU6-559P-201ENST00000516151 HNRNPUL2Q1KMD3 747 aaKnown RBP12.21□□□□□ -0.45
RNU6-559P-201ENST00000516151 SLC4A1APQ9BWU0 796 aaKnown RBP12.2□□□□□ -0.46
RNU6-559P-201ENST00000516151 DSG3P32926 999 aa12.15□□□□□ -0.46
RNU6-559P-201ENST00000516151 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
RNU6-559P-201ENST00000516151 MYCNP04198 464 aaPredicted RBP12.1□□□□□ -0.47
RNU6-559P-201ENST00000516151 ZNF219Q9P2Y4 722 aaPredicted RBP12.09□□□□□ -0.47
RNU6-559P-201ENST00000516151 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
RNU6-559P-201ENST00000516151 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
RNU6-559P-201ENST00000516151 ABCB7O75027 752 aa11.93□□□□□ -0.5
RNU6-559P-201ENST00000516151 ZBTB22O15209 634 aa11.85□□□□□ -0.51
RNU6-559P-201ENST00000516151 POLA2Q14181 598 aa11.75□□□□□ -0.53
RNU6-559P-201ENST00000516151 ATF5Q9Y2D1 282 aaPredicted RBP11.75□□□□□ -0.53
RNU6-559P-201ENST00000516151 ATXN8OSP0DMR3 200 aa11.69□□□□□ -0.54
RNU6-559P-201ENST00000516151 RBM42Q9BTD8 480 aaKnown RBP11.63□□□□□ -0.55
RNU6-559P-201ENST00000516151 ZBTB12Q9Y330 459 aaPredicted RBP11.6□□□□□ -0.55
RNU6-559P-201ENST00000516151 POTEHQ6S545 545 aa11.44□□□□□ -0.58
RNU6-559P-201ENST00000516151 CSRNP3Q8WYN3 585 aa11.41□□□□□ -0.58
RNU6-559P-201ENST00000516151 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
RNU6-559P-201ENST00000516151 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
RNU6-559P-201ENST00000516151 FBLN2P98095 1184 aa11.33□□□□□ -0.6
RNU6-559P-201ENST00000516151 CHRDL2Q6WN34 429 aa11.29□□□□□ -0.6
RNU6-559P-201ENST00000516151 EHMT2Q96KQ7 1210 aa11.28□□□□□ -0.6
RNU6-559P-201ENST00000516151 MKRN4PQ13434 485 aaPredicted RBP11.24□□□□□ -0.61
RNU6-559P-201ENST00000516151 REM2Q8IYK8 340 aaPredicted RBP11.24□□□□□ -0.61
RNU6-559P-201ENST00000516151 SPDYE2BA6NHP3 402 aa11.23□□□□□ -0.61
RNU6-559P-201ENST00000516151 SPDYE6P0CI01 402 aa11.23□□□□□ -0.61
RNU6-559P-201ENST00000516151 SPDYE2Q495Y8 402 aa11.23□□□□□ -0.61
RNU6-559P-201ENST00000516151 PITPNM1O00562 1244 aa11.11□□□□□ -0.63
RNU6-559P-201ENST00000516151 SSUH2Q9Y2M2 353 aa11.1□□□□□ -0.63
RNU6-559P-201ENST00000516151 ZNF692Q9BU19 519 aaPredicted RBP11.07□□□□□ -0.64
RNU6-559P-201ENST00000516151 PIP4P2Q8N4L2 257 aa11.04□□□□□ -0.64
RNU6-559P-201ENST00000516151 FXR2P51116 673 aaKnown RBP eCLIP11.01□□□□□ -0.65
RNU6-559P-201ENST00000516151 SPDYE1Q8NFV5 336 aaPredicted RBP11□□□□□ -0.65
RNU6-559P-201ENST00000516151 PABPN1Q86U42 306 aaKnown RBP eCLIP10.91□□□□□ -0.66
RNU6-559P-201ENST00000516151 CLEC11AQ9Y240 323 aa10.91□□□□□ -0.66
RNU6-559P-201ENST00000516151 PRKAR2AP13861 404 aaKnown RBP10.82□□□□□ -0.68
RNU6-559P-201ENST00000516151 SP7Q8TDD2 431 aaPredicted RBP10.79□□□□□ -0.68
RNU6-559P-201ENST00000516151 HAX1O00165 279 aa10.78□□□□□ -0.68
RNU6-559P-201ENST00000516151 PRR29P0C7W0 189 aa10.78□□□□□ -0.68
RNU6-559P-201ENST00000516151 SPDYE4A6NLX3 237 aa10.77□□□□□ -0.69
RNU6-559P-201ENST00000516151 CHADLQ6NUI6 762 aa10.69□□□□□ -0.7
RNU6-559P-201ENST00000516151 STAG3Q9UJ98 1225 aa10.68□□□□□ -0.7
RNU6-559P-201ENST00000516151 C19orf67A6NJJ6 358 aa10.66□□□□□ -0.7
RNU6-559P-201ENST00000516151 EVX2Q03828 476 aa10.64□□□□□ -0.71
RNU6-559P-201ENST00000516151 PROM2Q8N271 834 aa10.58□□□□□ -0.72
RNU6-559P-201ENST00000516151 FARP1Q9Y4F1 1045 aaPredicted RBP10.58□□□□□ -0.72
RNU6-559P-201ENST00000516151 CREBZFQ9NS37 354 aa10.55□□□□□ -0.72
RNU6-559P-201ENST00000516151 CD44P16070 742 aaKnown RBP10.49□□□□□ -0.73
RNU6-559P-201ENST00000516151 GABBR2O75899 941 aa10.44□□□□□ -0.74
RNU6-559P-201ENST00000516151 MNX1P50219 401 aaPredicted RBP10.4□□□□□ -0.74
RNU6-559P-201ENST00000516151 CLCN6P51797 869 aa10.4□□□□□ -0.74
RNU6-559P-201ENST00000516151 NPM1P06748 294 aaKnown RBP eCLIP10.38□□□□□ -0.75
RNU6-559P-201ENST00000516151 ZNF579Q8NAF0 562 aaKnown RBP10.37□□□□□ -0.75
RNU6-559P-201ENST00000516151 ZRANB1Q9UGI0 708 aa10.35□□□□□ -0.75
RNU6-559P-201ENST00000516151 FKBP8Q14318 412 aa10.33□□□□□ -0.76
RNU6-559P-201ENST00000516151 PAK3O75914 559 aaPredicted RBP10.31□□□□□ -0.76
RNU6-559P-201ENST00000516151 PLEKHG5O94827 1062 aa10.26□□□□□ -0.77
RNU6-559P-201ENST00000516151 MIER1Q8N108 512 aa10.24□□□□□ -0.77
RNU6-559P-201ENST00000516151 POTEIP0CG38 1075 aa10.22□□□□□ -0.77
RNU6-559P-201ENST00000516151 PHF12Q96QT6 1004 aa10.21□□□□□ -0.77
RNU6-559P-201ENST00000516151 GALR2O43603 387 aaPredicted RBP10.18□□□□□ -0.78
RNU6-559P-201ENST00000516151 PLCD3Q8N3E9 789 aa10.18□□□□□ -0.78
RNU6-559P-201ENST00000516151 DCBLD2Q96PD2 775 aa10.18□□□□□ -0.78
RNU6-559P-201ENST00000516151 ZBTB47Q9UFB7 747 aaPredicted RBP10.15□□□□□ -0.78
RNU6-559P-201ENST00000516151 TSPYL2Q9H2G4 693 aaPredicted RBP10.14□□□□□ -0.79
RNU6-559P-201ENST00000516151 FBXO3Q9UK99 471 aa10.14□□□□□ -0.79
RNU6-559P-201ENST00000516151 CCDC61Q9Y6R9 512 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms