Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 RN7SL647P-201ENST00000485429 300 ntBASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 RN7SL776P-201ENST00000493390 268 ntBASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 AC044787.1-201ENST00000497325 792 ntBASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 AC068531.1-201ENST00000502398 195 ntBASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 OR51A1P-201ENST00000511110 946 ntBASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 EEF1B2P2-201ENST00000519625 676 ntBASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 IGLC5-201ENST00000519670 293 ntBASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 MTND4P7-201ENST00000523876 130 ntBASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 MIR4682-201ENST00000580643 80 ntBASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 AC007785.1-201ENST00000597989 332 ntTSL 5 BASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 AP001521.1-201ENST00000609150 300 ntBASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 MAK-202ENST00000354489 3941 ntTSL 5 BASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 TNFSF15-201ENST00000374044 2789 ntBASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SCAF1Q9H7N4 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 SNORA30B-201ENST00000365319 129 ntBASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 RNU6-44P-201ENST00000384045 107 ntBASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 AL451139.1-201ENST00000434718 346 ntBASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 AL450996.1-201ENST00000445574 1202 ntBASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 AC073610.1-201ENST00000489971 396 ntBASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 AC244505.1-201ENST00000502642 307 ntBASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 LINC01085-203ENST00000511195 326 ntBASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 AP002392.1-201ENST00000537692 208 ntBASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 AC018552.3-201ENST00000567416 561 ntBASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 AL590560.2-201ENST00000608430 732 ntBASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 MLANA-203ENST00000381477 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 RBMS2-204ENST00000550726 1452 ntTSL 2 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 AC036108.4-201ENST00000611654 2516 ntBASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 AL035555.1-201ENST00000404462 1790 ntBASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 LRRC37A11P-202ENST00000579258 3717 ntBASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SCAF1Q9H7N4 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
SCAF1Q9H7N4 AC010886.1-201ENST00000437380 2869 ntBASIC12.15□□□□□ -0.47
SCAF1Q9H7N4 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 FTH1P3-201ENST00000394290 584 ntBASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 AC090686.1-201ENST00000481577 749 ntBASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 RNU7-200P-201ENST00000516105 62 ntBASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 AP002802.1-201ENST00000526154 342 ntTSL 3 BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 NCKAP1L-202ENST00000545638 3612 ntTSL 2 BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms