RNA–Protein interactions for RNA: ENST00000574021.1

AC002558.3-201, humanhuman

TSL 3 BASIC

Gene AC002558.3, Length 401 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002558.3-201ENST00000574021 AEBP2Q6ZN18 517 aaPredicted RBP17.77■□□□□ 0.44
AC002558.3-201ENST00000574021 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.28
AC002558.3-201ENST00000574021 SENP3Q9H4L4 574 aaPredicted RBP15.39■□□□□ 0.05
AC002558.3-201ENST00000574021 PHF23Q9BUL5 403 aaPredicted RBP15.09■□□□□ 0.01
AC002558.3-201ENST00000574021 FOXD1Q16676 465 aa14.27□□□□□ -0.13
AC002558.3-201ENST00000574021 POTEDQ86YR6 584 aa13.63□□□□□ -0.23
AC002558.3-201ENST00000574021 MSH5O43196 834 aa13.59□□□□□ -0.23
AC002558.3-201ENST00000574021 PIAS4Q8N2W9 510 aaPredicted RBP13.35□□□□□ -0.27
AC002558.3-201ENST00000574021 PLPPR3Q6T4P5 718 aa13.31□□□□□ -0.28
AC002558.3-201ENST00000574021 ADRA2BP18089 450 aa13.07□□□□□ -0.32
AC002558.3-201ENST00000574021 PPP6R1Q9UPN7 881 aa13.06□□□□□ -0.32
AC002558.3-201ENST00000574021 SCAF1Q9H7N4 1312 aaKnown RBP12.15□□□□□ -0.46
AC002558.3-201ENST00000574021 DMRT2Q9Y5R5 561 aa12.09□□□□□ -0.47
AC002558.3-201ENST00000574021 MAPK8IP2Q13387 824 aaPredicted RBP12.06□□□□□ -0.48
AC002558.3-201ENST00000574021 CACNB1Q02641 598 aaPredicted RBP11.85□□□□□ -0.51
AC002558.3-201ENST00000574021 DCAF8L1A6NGE4 600 aa11.76□□□□□ -0.53
AC002558.3-201ENST00000574021 PPP4R3CPQ6ZMV5 832 aa11.58□□□□□ -0.56
AC002558.3-201ENST00000574021 HOXD11P31277 338 aaPredicted RBP11.52□□□□□ -0.57
AC002558.3-201ENST00000574021 RNF39Q9H2S5 420 aa11.48□□□□□ -0.57
AC002558.3-201ENST00000574021 CNKSR2Q8WXI2 1034 aa11.47□□□□□ -0.57
AC002558.3-201ENST00000574021 RNF216Q9NWF9 866 aaPredicted RBP11.41□□□□□ -0.58
AC002558.3-201ENST00000574021 C1QBPQ07021 282 aaKnown RBP11.38□□□□□ -0.59
AC002558.3-201ENST00000574021 DNAJC5BQ9UF47 199 aa11.23□□□□□ -0.61
AC002558.3-201ENST00000574021 NCBP3Q53F19 620 aaKnown RBP11.18□□□□□ -0.62
AC002558.3-201ENST00000574021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.11□□□□□ -0.63
AC002558.3-201ENST00000574021 NPM3O75607 178 aaKnown RBP10.85□□□□□ -0.67
AC002558.3-201ENST00000574021 CAPN15O75808 1086 aa10.76□□□□□ -0.69
AC002558.3-201ENST00000574021 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
AC002558.3-201ENST00000574021 POTEHQ6S545 545 aa10.68□□□□□ -0.7
AC002558.3-201ENST00000574021 DSG3P32926 999 aa10.66□□□□□ -0.7
AC002558.3-201ENST00000574021 SPINK5Q9NQ38 1064 aaPredicted RBP10.64□□□□□ -0.71
AC002558.3-201ENST00000574021 APLP2Q06481 763 aa10.62□□□□□ -0.71
AC002558.3-201ENST00000574021 TRHP20396 242 aaPredicted RBP10.51□□□□□ -0.73
AC002558.3-201ENST00000574021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.5□□□□□ -0.73
AC002558.3-201ENST00000574021 HNRNPUL2Q1KMD3 747 aaKnown RBP10.5□□□□□ -0.73
AC002558.3-201ENST00000574021 ZNF219Q9P2Y4 722 aaPredicted RBP10.5□□□□□ -0.73
AC002558.3-201ENST00000574021 ABCB7O75027 752 aa10.42□□□□□ -0.74
AC002558.3-201ENST00000574021 SLC4A2P04920 1241 aa10.38□□□□□ -0.75
AC002558.3-201ENST00000574021 SAMD1Q6SPF0 538 aaPredicted RBP10.38□□□□□ -0.75
AC002558.3-201ENST00000574021 KCNA4P22459 653 aa10.37□□□□□ -0.75
AC002558.3-201ENST00000574021 RBM42Q9BTD8 480 aaKnown RBP10.32□□□□□ -0.76
AC002558.3-201ENST00000574021 POLA2Q14181 598 aa10.13□□□□□ -0.79
AC002558.3-201ENST00000574021 MYCNP04198 464 aaPredicted RBP10.12□□□□□ -0.79
AC002558.3-201ENST00000574021 CHRDL2Q6WN34 429 aa10.12□□□□□ -0.79
AC002558.3-201ENST00000574021 ZBTB12Q9Y330 459 aaPredicted RBP10□□□□□ -0.81
AC002558.3-201ENST00000574021 AKT1S1Q96B36 256 aa9.96□□□□□ -0.82
AC002558.3-201ENST00000574021 SP7Q8TDD2 431 aaPredicted RBP9.89□□□□□ -0.83
AC002558.3-201ENST00000574021 FOXD4L1Q9NU39 408 aa9.85□□□□□ -0.83
AC002558.3-201ENST00000574021 SLC4A1APQ9BWU0 796 aaKnown RBP9.83□□□□□ -0.84
AC002558.3-201ENST00000574021 REM2Q8IYK8 340 aaPredicted RBP9.82□□□□□ -0.84
AC002558.3-201ENST00000574021 HAX1O00165 279 aa9.78□□□□□ -0.84
AC002558.3-201ENST00000574021 OSCARQ8IYS5 282 aa9.78□□□□□ -0.84
AC002558.3-201ENST00000574021 PIP4P2Q8N4L2 257 aa9.77□□□□□ -0.85
AC002558.3-201ENST00000574021 ATF5Q9Y2D1 282 aaPredicted RBP9.76□□□□□ -0.85
AC002558.3-201ENST00000574021 PITPNM1O00562 1244 aa9.69□□□□□ -0.86
AC002558.3-201ENST00000574021 FXR2P51116 673 aaKnown RBP eCLIP9.66□□□□□ -0.86
AC002558.3-201ENST00000574021 FBLN2P98095 1184 aa9.63□□□□□ -0.87
AC002558.3-201ENST00000574021 SPDYE2BA6NHP3 402 aa9.6□□□□□ -0.87
AC002558.3-201ENST00000574021 SPDYE6P0CI01 402 aa9.6□□□□□ -0.87
AC002558.3-201ENST00000574021 SPDYE2Q495Y8 402 aa9.6□□□□□ -0.87
AC002558.3-201ENST00000574021 ATXN8OSP0DMR3 200 aa9.59□□□□□ -0.87
AC002558.3-201ENST00000574021 CLEC11AQ9Y240 323 aa9.55□□□□□ -0.88
AC002558.3-201ENST00000574021 SPDYE1Q8NFV5 336 aaPredicted RBP9.53□□□□□ -0.88
AC002558.3-201ENST00000574021 PRKAR2AP13861 404 aaKnown RBP9.51□□□□□ -0.89
AC002558.3-201ENST00000574021 ZBTB22O15209 634 aa9.5□□□□□ -0.89
AC002558.3-201ENST00000574021 ZNF692Q9BU19 519 aaPredicted RBP9.46□□□□□ -0.9
AC002558.3-201ENST00000574021 EVX2Q03828 476 aa9.45□□□□□ -0.9
AC002558.3-201ENST00000574021 EHMT2Q96KQ7 1210 aa9.44□□□□□ -0.9
AC002558.3-201ENST00000574021 C19orf67A6NJJ6 358 aa9.37□□□□□ -0.91
AC002558.3-201ENST00000574021 PRR29P0C7W0 189 aa9.35□□□□□ -0.91
AC002558.3-201ENST00000574021 SSUH2Q9Y2M2 353 aa9.35□□□□□ -0.91
AC002558.3-201ENST00000574021 GABBR2O75899 941 aa9.32□□□□□ -0.92
AC002558.3-201ENST00000574021 CSRNP3Q8WYN3 585 aa9.31□□□□□ -0.92
AC002558.3-201ENST00000574021 MKRN4PQ13434 485 aaPredicted RBP9.3□□□□□ -0.92
AC002558.3-201ENST00000574021 LHX8Q68G74 356 aa9.29□□□□□ -0.92
AC002558.3-201ENST00000574021 CHADLQ6NUI6 762 aa9.29□□□□□ -0.92
AC002558.3-201ENST00000574021 PABPN1Q86U42 306 aaKnown RBP eCLIP9.28□□□□□ -0.92
AC002558.3-201ENST00000574021 CLCN6P51797 869 aa9.22□□□□□ -0.93
AC002558.3-201ENST00000574021 CD44P16070 742 aaKnown RBP9.2□□□□□ -0.94
AC002558.3-201ENST00000574021 FARP1Q9Y4F1 1045 aaPredicted RBP9.15□□□□□ -0.94
AC002558.3-201ENST00000574021 DCBLD2Q96PD2 775 aa9.13□□□□□ -0.95
AC002558.3-201ENST00000574021 STAG3Q9UJ98 1225 aa9.06□□□□□ -0.96
AC002558.3-201ENST00000574021 ZRANB1Q9UGI0 708 aa9.04□□□□□ -0.96
AC002558.3-201ENST00000574021 PAK3O75914 559 aaPredicted RBP9.02□□□□□ -0.97
AC002558.3-201ENST00000574021 POTEIP0CG38 1075 aa9.02□□□□□ -0.97
AC002558.3-201ENST00000574021 ZNF579Q8NAF0 562 aaKnown RBP9□□□□□ -0.97
AC002558.3-201ENST00000574021 PLSCR2Q9NRY7 297 aa8.99□□□□□ -0.97
AC002558.3-201ENST00000574021 NPM1P06748 294 aaKnown RBP eCLIP8.92□□□□□ -0.98
AC002558.3-201ENST00000574021 CREBZFQ9NS37 354 aa8.91□□□□□ -0.98
AC002558.3-201ENST00000574021 GALR2O43603 387 aaPredicted RBP8.88□□□□□ -0.99
AC002558.3-201ENST00000574021 SPDYE4A6NLX3 237 aa8.86□□□□□ -0.99
AC002558.3-201ENST00000574021 PHF12Q96QT6 1004 aa8.81□□□□□ -1
AC002558.3-201ENST00000574021 OTUD5Q96G74 571 aa8.79□□□□□ -1
AC002558.3-201ENST00000574021 POTEMA6NI47 508 aa8.76□□□□□ -1.01
AC002558.3-201ENST00000574021 MAMSTRQ6ZN01 415 aa8.75□□□□□ -1.01
AC002558.3-201ENST00000574021 SLC39A7Q92504 469 aa8.74□□□□□ -1.01
AC002558.3-201ENST00000574021 C7P10643 843 aa8.73□□□□□ -1.01
AC002558.3-201ENST00000574021 POTEB2H3BUK9 544 aa8.72□□□□□ -1.01
AC002558.3-201ENST00000574021 POTEGQ6S5H5 508 aa8.72□□□□□ -1.01
AC002558.3-201ENST00000574021 METRNQ9UJH8 293 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms