Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
TRIM11Q96F44 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
TRIM11Q96F44 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
TRIM11Q96F44 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM11Q96F44 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM11Q96F44 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM11Q96F44 AL731556.1-201ENST00000394628 3711 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 MTCO1P9-201ENST00000505577 1534 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 RNU6-254P-201ENST00000363377 107 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 Y_RNA.394-201ENST00000383942 103 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 LDHAP5-201ENST00000394996 622 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 LSM5-205ENST00000409952 687 ntTSL 4 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 TAF13P2-201ENST00000416876 286 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 FDPSP6-201ENST00000425091 512 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 TIMM9P3-201ENST00000428659 274 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 EMC3-AS1-205ENST00000438698 534 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 AC239800.1-201ENST00000442049 719 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 RPS4XP4-201ENST00000443195 763 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 SNRPBP1-201ENST00000443634 282 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 AL591363.1-201ENST00000450091 483 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 OR6C5P-201ENST00000452388 923 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 PNPLA4P1-201ENST00000458328 305 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 MAL2-205ENST00000521048 575 ntTSL 4 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 AF235103.2-201ENST00000525753 346 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 AC008147.3-201ENST00000548666 354 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 AL592295.2-201ENST00000612578 206 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 AL359694.2-201ENST00000567753 1615 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 AC010401.2-201ENST00000575137 4934 ntBASIC7.07□□□□□ -1.28
TRIM11Q96F44 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM11Q96F44 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM11Q96F44 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM11Q96F44 MTCO1P11-201ENST00000429111 1528 ntBASIC7.06□□□□□ -1.28
TRIM11Q96F44 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM11Q96F44 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM11Q96F44 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM11Q96F44 AC009779.8-201ENST00000641684 4384 ntBASIC7.06□□□□□ -1.28
TRIM11Q96F44 AC062022.1-201ENST00000451026 1684 ntBASIC7.06□□□□□ -1.28
TRIM11Q96F44 CASC19-228ENST00000641414 1684 ntBASIC7.06□□□□□ -1.28
TRIM11Q96F44 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM11Q96F44 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM11Q96F44 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.06□□□□□ -1.28
TRIM11Q96F44 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM11Q96F44 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
TRIM11Q96F44 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.06□□□□□ -1.28
TRIM11Q96F44 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM11Q96F44 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
TRIM11Q96F44 UBBP1-201ENST00000392399 473 ntBASIC7.06□□□□□ -1.28
TRIM11Q96F44 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.06□□□□□ -1.28
TRIM11Q96F44 RN7SKP117-201ENST00000410175 264 ntBASIC7.06□□□□□ -1.28
TRIM11Q96F44 AL161631.1-201ENST00000417933 486 ntBASIC7.06□□□□□ -1.28
TRIM11Q96F44 MYB-206ENST00000420123 1051 ntTSL 5 BASIC7.06□□□□□ -1.28
TRIM11Q96F44 RNGTTP1-201ENST00000420965 728 ntBASIC7.06□□□□□ -1.28
TRIM11Q96F44 AL353729.1-201ENST00000425044 720 ntBASIC7.06□□□□□ -1.28
TRIM11Q96F44 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.06□□□□□ -1.28
TRIM11Q96F44 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC7.06□□□□□ -1.28
TRIM11Q96F44 HMGB3P9-201ENST00000441799 583 ntBASIC7.06□□□□□ -1.28
TRIM11Q96F44 AL158214.1-201ENST00000444423 404 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms