Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 Z99129.4-201ENST00000624649 2435 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 TATDN2P3-201ENST00000452855 3665 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AC103591.2-201ENST00000265259 766 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 SNORD16-201ENST00000362803 99 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 MT-TR-201ENST00000387439 65 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 RNA5SP80-201ENST00000410475 111 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AC004987.3-201ENST00000413879 771 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AC016769.2-201ENST00000414815 475 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AC079355.1-201ENST00000421770 223 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 GTF2IP23-201ENST00000423746 351 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 MTND3P2-201ENST00000438452 342 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AC244505.5-201ENST00000443639 207 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 RPL31P15-201ENST00000449770 338 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 MTCO3P11-201ENST00000455103 774 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AC093166.4-201ENST00000457867 318 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 RN7SL273P-201ENST00000481561 299 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 RPS4XP15-201ENST00000489210 795 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AC009646.1-201ENST00000510455 318 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 UBE2Q2P10-201ENST00000514854 900 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 OR7K1P-201ENST00000546439 926 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AC007956.1-201ENST00000555623 542 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 SUMO2P14-201ENST00000604488 293 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AC069304.2-201ENST00000605154 435 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AL590282.1-201ENST00000610379 1136 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AC127024.6-201ENST00000621598 424 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AL590763.1-201ENST00000398297 1545 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 AP001157.1-201ENST00000550837 2339 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 BTK-209ENST00000618050 2417 ntTSL 5 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 RNU6-660P-201ENST00000364566 109 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 IARS-201ENST00000375627 697 ntTSL 3 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 Y_RNA.419-201ENST00000384041 102 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 CALM2P3-201ENST00000400429 449 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 RN7SKP58-201ENST00000411010 305 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 RPL12P9-201ENST00000412942 488 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 AL009174.1-201ENST00000426577 416 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 SAR1AP4-201ENST00000429225 591 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 FMO7P-201ENST00000436045 768 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 AC023141.3-201ENST00000436698 278 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 EIF4A1P6-201ENST00000448133 1210 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 AL133351.3-201ENST00000454998 193 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 SNORD42A-201ENST00000459584 64 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 AC115223.1-201ENST00000466377 870 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 OR2A1-AS1-202ENST00000467944 422 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 RPS29P25-201ENST00000481709 171 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 AL354718.1-201ENST00000619764 589 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 CYP2G2P-201ENST00000594920 1485 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms