Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
RIPK4P57078 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
RIPK4P57078 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.27□□□□□ -1.41
RIPK4P57078 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.27□□□□□ -1.41
RIPK4P57078 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.27□□□□□ -1.41
RIPK4P57078 AL672167.1-204ENST00000641875 3017 ntBASIC6.27□□□□□ -1.41
RIPK4P57078 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
RIPK4P57078 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RIPK4P57078 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.27□□□□□ -1.41
RIPK4P57078 AC017079.1-201ENST00000333650 415 ntBASIC6.27□□□□□ -1.41
RIPK4P57078 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.27□□□□□ -1.41
RIPK4P57078 CYB5AP4-201ENST00000396692 399 ntBASIC6.27□□□□□ -1.41
RIPK4P57078 BX510359.2-201ENST00000417920 305 ntBASIC6.27□□□□□ -1.41
RIPK4P57078 FABP7P1-201ENST00000424004 391 ntBASIC6.27□□□□□ -1.41
RIPK4P57078 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.27□□□□□ -1.41
RIPK4P57078 GYG1P1-201ENST00000460864 698 ntBASIC6.27□□□□□ -1.41
RIPK4P57078 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.27□□□□□ -1.41
RIPK4P57078 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RIPK4P57078 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.27□□□□□ -1.41
RIPK4P57078 RNA5SP464-201ENST00000516251 108 ntBASIC6.27□□□□□ -1.41
RIPK4P57078 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC6.27□□□□□ -1.41
RIPK4P57078 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC6.27□□□□□ -1.41
RIPK4P57078 FKBP1BP1-201ENST00000553366 325 ntBASIC6.27□□□□□ -1.41
RIPK4P57078 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.27□□□□□ -1.41
RIPK4P57078 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.27□□□□□ -1.41
RIPK4P57078 AC098935.2-201ENST00000604222 466 ntBASIC6.27□□□□□ -1.41
RIPK4P57078 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.27□□□□□ -1.41
RIPK4P57078 MIR7703-201ENST00000620784 77 ntBASIC6.27□□□□□ -1.41
RIPK4P57078 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.27□□□□□ -1.41
RIPK4P57078 AC083843.3-201ENST00000623679 2186 ntBASIC6.27□□□□□ -1.41
RIPK4P57078 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RIPK4P57078 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.26□□□□□ -1.41
RIPK4P57078 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RIPK4P57078 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RIPK4P57078 AC007382.1-201ENST00000624376 2618 ntBASIC6.26□□□□□ -1.41
RIPK4P57078 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.26□□□□□ -1.41
RIPK4P57078 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RIPK4P57078 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RIPK4P57078 OR5M12P-201ENST00000423388 929 ntBASIC6.26□□□□□ -1.41
RIPK4P57078 NPM1P25-201ENST00000429734 854 ntBASIC6.26□□□□□ -1.41
RIPK4P57078 AC090686.1-201ENST00000481577 749 ntBASIC6.26□□□□□ -1.41
RIPK4P57078 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.26□□□□□ -1.41
RIPK4P57078 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.26□□□□□ -1.41
RIPK4P57078 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.26□□□□□ -1.41
RIPK4P57078 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.26□□□□□ -1.41
RIPK4P57078 AL390726.5-202ENST00000564800 256 ntBASIC6.26□□□□□ -1.41
RIPK4P57078 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.26□□□□□ -1.41
RIPK4P57078 CYCSP40-201ENST00000575927 294 ntBASIC6.26□□□□□ -1.41
RIPK4P57078 MIR4700-201ENST00000578311 74 ntBASIC6.26□□□□□ -1.41
RIPK4P57078 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.26□□□□□ -1.41
RIPK4P57078 AL161616.1-201ENST00000611867 286 ntBASIC6.26□□□□□ -1.41
RIPK4P57078 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
RIPK4P57078 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.26□□□□□ -1.41
RIPK4P57078 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RIPK4P57078 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6.26□□□□□ -1.41
RIPK4P57078 DDX18P5-201ENST00000534547 1306 ntBASIC6.25□□□□□ -1.41
RIPK4P57078 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RIPK4P57078 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
RIPK4P57078 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RIPK4P57078 AL590240.1-201ENST00000334118 313 ntBASIC6.25□□□□□ -1.41
RIPK4P57078 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
RIPK4P57078 OR51B3P-201ENST00000412287 913 ntBASIC6.25□□□□□ -1.41
RIPK4P57078 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.25□□□□□ -1.41
RIPK4P57078 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.25□□□□□ -1.41
RIPK4P57078 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6.25□□□□□ -1.41
RIPK4P57078 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.25□□□□□ -1.41
RIPK4P57078 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.25□□□□□ -1.41
RIPK4P57078 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.25□□□□□ -1.41
RIPK4P57078 AC007686.1-201ENST00000488511 463 ntBASIC6.25□□□□□ -1.41
RIPK4P57078 RPS23P1-201ENST00000491662 432 ntBASIC6.25□□□□□ -1.41
RIPK4P57078 RNU2-30P-201ENST00000516209 141 ntBASIC6.25□□□□□ -1.41
RIPK4P57078 RNU1-6P-201ENST00000516290 144 ntBASIC6.25□□□□□ -1.41
RIPK4P57078 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.25□□□□□ -1.41
RIPK4P57078 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.25□□□□□ -1.41
RIPK4P57078 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.25□□□□□ -1.41
RIPK4P57078 AL390334.1-201ENST00000556395 450 ntBASIC6.25□□□□□ -1.41
RIPK4P57078 AC087477.6-201ENST00000559595 843 ntBASIC6.25□□□□□ -1.41
RIPK4P57078 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.25□□□□□ -1.41
RIPK4P57078 DPRXP4-201ENST00000578053 568 ntBASIC6.25□□□□□ -1.41
RIPK4P57078 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC6.25□□□□□ -1.41
RIPK4P57078 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.25□□□□□ -1.41
RIPK4P57078 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RIPK4P57078 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RIPK4P57078 AC073342.3-201ENST00000624211 193 ntBASIC6.25□□□□□ -1.41
RIPK4P57078 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.25□□□□□ -1.41
RIPK4P57078 AC012618.3-205ENST00000637896 1496 ntBASIC6.25□□□□□ -1.41
RIPK4P57078 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RIPK4P57078 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.25□□□□□ -1.41
RIPK4P57078 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RIPK4P57078 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK4P57078 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK4P57078 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6.24□□□□□ -1.41
RIPK4P57078 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK4P57078 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK4P57078 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.24□□□□□ -1.41
RIPK4P57078 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK4P57078 AC008549.2-201ENST00000333482 706 ntBASIC6.24□□□□□ -1.41
RIPK4P57078 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RIPK4P57078 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RIPK4P57078 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms