RNA–Protein interactions for RNA: ENST00000529088.1

LINC02553-201, Transcript of long intergenic non-protein coding RNA 2553, humanhuman

TSL 5 BASIC

Gene LINC02553, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02553-201ENST00000529088 AEBP2Q6ZN18 517 aaPredicted RBP30.23■■■□□ 2.43
LINC02553-201ENST00000529088 CHIC1Q5VXU3 224 aa28.55■■■□□ 2.16
LINC02553-201ENST00000529088 SENP3Q9H4L4 574 aaPredicted RBP25.63■■□□□ 1.69
LINC02553-201ENST00000529088 PHF23Q9BUL5 403 aaPredicted RBP25.39■■□□□ 1.66
LINC02553-201ENST00000529088 FOXD1Q16676 465 aa24.01■■□□□ 1.43
LINC02553-201ENST00000529088 PLPPR3Q6T4P5 718 aa22.75■■□□□ 1.23
LINC02553-201ENST00000529088 PPP6R1Q9UPN7 881 aa22.49■■□□□ 1.19
LINC02553-201ENST00000529088 ADRA2BP18089 450 aa22.42■■□□□ 1.18
LINC02553-201ENST00000529088 PIAS4Q8N2W9 510 aaPredicted RBP22.42■■□□□ 1.18
LINC02553-201ENST00000529088 MSH5O43196 834 aa22.34■■□□□ 1.17
LINC02553-201ENST00000529088 POTEDQ86YR6 584 aa22.01■■□□□ 1.11
LINC02553-201ENST00000529088 MAPK8IP2Q13387 824 aaPredicted RBP20.63■□□□□ 0.89
LINC02553-201ENST00000529088 DMRT2Q9Y5R5 561 aa20.34■□□□□ 0.85
LINC02553-201ENST00000529088 SCAF1Q9H7N4 1312 aaKnown RBP20.29■□□□□ 0.84
LINC02553-201ENST00000529088 PPP4R3CPQ6ZMV5 832 aa20.01■□□□□ 0.79
LINC02553-201ENST00000529088 DCAF8L1A6NGE4 600 aa19.64■□□□□ 0.73
LINC02553-201ENST00000529088 CNKSR2Q8WXI2 1034 aa19.57■□□□□ 0.72
LINC02553-201ENST00000529088 HOXD11P31277 338 aaPredicted RBP19.56■□□□□ 0.72
LINC02553-201ENST00000529088 RNF216Q9NWF9 866 aaPredicted RBP19.4■□□□□ 0.7
LINC02553-201ENST00000529088 CACNB1Q02641 598 aaPredicted RBP19.3■□□□□ 0.68
LINC02553-201ENST00000529088 RNF39Q9H2S5 420 aa19.13■□□□□ 0.65
LINC02553-201ENST00000529088 NCBP3Q53F19 620 aaKnown RBP19.12■□□□□ 0.65
LINC02553-201ENST00000529088 NPM3O75607 178 aaKnown RBP18.97■□□□□ 0.63
LINC02553-201ENST00000529088 C1QBPQ07021 282 aaKnown RBP18.78■□□□□ 0.6
LINC02553-201ENST00000529088 DNAJC5BQ9UF47 199 aa18.74■□□□□ 0.59
LINC02553-201ENST00000529088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.7■□□□□ 0.58
LINC02553-201ENST00000529088 KCNA4P22459 653 aa18.63■□□□□ 0.57
LINC02553-201ENST00000529088 U3KPZ7 1027 aaPredicted RBP18.33■□□□□ 0.52
LINC02553-201ENST00000529088 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
LINC02553-201ENST00000529088 SPINK5Q9NQ38 1064 aaPredicted RBP18.14■□□□□ 0.49
LINC02553-201ENST00000529088 CAPN15O75808 1086 aa18.06■□□□□ 0.48
LINC02553-201ENST00000529088 DSG3P32926 999 aa17.93■□□□□ 0.46
LINC02553-201ENST00000529088 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
LINC02553-201ENST00000529088 ABCB7O75027 752 aa17.71■□□□□ 0.43
LINC02553-201ENST00000529088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.62■□□□□ 0.41
LINC02553-201ENST00000529088 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
LINC02553-201ENST00000529088 APLP2Q06481 763 aa17.6■□□□□ 0.41
LINC02553-201ENST00000529088 ZNF219Q9P2Y4 722 aaPredicted RBP17.6■□□□□ 0.41
LINC02553-201ENST00000529088 SAMD1Q6SPF0 538 aaPredicted RBP17.56■□□□□ 0.4
LINC02553-201ENST00000529088 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
LINC02553-201ENST00000529088 MYCNP04198 464 aaPredicted RBP17.47■□□□□ 0.39
LINC02553-201ENST00000529088 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
LINC02553-201ENST00000529088 POLA2Q14181 598 aa17.27■□□□□ 0.36
LINC02553-201ENST00000529088 ATF5Q9Y2D1 282 aaPredicted RBP17.24■□□□□ 0.35
LINC02553-201ENST00000529088 POTEHQ6S545 545 aa17.22■□□□□ 0.35
LINC02553-201ENST00000529088 ZBTB22O15209 634 aa17.16■□□□□ 0.34
LINC02553-201ENST00000529088 RBM42Q9BTD8 480 aaKnown RBP16.98■□□□□ 0.31
LINC02553-201ENST00000529088 OSCARQ8IYS5 282 aa16.75■□□□□ 0.27
LINC02553-201ENST00000529088 CHRDL2Q6WN34 429 aa16.74■□□□□ 0.27
LINC02553-201ENST00000529088 ZBTB12Q9Y330 459 aaPredicted RBP16.74■□□□□ 0.27
LINC02553-201ENST00000529088 ATXN8OSP0DMR3 200 aa16.66■□□□□ 0.26
LINC02553-201ENST00000529088 AKT1S1Q96B36 256 aa16.63■□□□□ 0.25
LINC02553-201ENST00000529088 REM2Q8IYK8 340 aaPredicted RBP16.55■□□□□ 0.24
LINC02553-201ENST00000529088 PITPNM1O00562 1244 aa16.4■□□□□ 0.22
LINC02553-201ENST00000529088 MKRN4PQ13434 485 aaPredicted RBP16.4■□□□□ 0.22
LINC02553-201ENST00000529088 FBLN2P98095 1184 aa16.39■□□□□ 0.21
LINC02553-201ENST00000529088 PIP4P2Q8N4L2 257 aa16.36■□□□□ 0.21
LINC02553-201ENST00000529088 CSRNP3Q8WYN3 585 aa16.3■□□□□ 0.2
LINC02553-201ENST00000529088 SPDYE2BA6NHP3 402 aa16.28■□□□□ 0.2
LINC02553-201ENST00000529088 SPDYE6P0CI01 402 aa16.28■□□□□ 0.2
LINC02553-201ENST00000529088 SPDYE2Q495Y8 402 aa16.28■□□□□ 0.2
LINC02553-201ENST00000529088 FXR2P51116 673 aaKnown RBP eCLIP16.2■□□□□ 0.18
LINC02553-201ENST00000529088 ZNF692Q9BU19 519 aaPredicted RBP16.16■□□□□ 0.18
LINC02553-201ENST00000529088 EHMT2Q96KQ7 1210 aa16.14■□□□□ 0.17
LINC02553-201ENST00000529088 CLEC11AQ9Y240 323 aa16.13■□□□□ 0.17
LINC02553-201ENST00000529088 SP7Q8TDD2 431 aaPredicted RBP16.1■□□□□ 0.17
LINC02553-201ENST00000529088 HAX1O00165 279 aa16.09■□□□□ 0.17
LINC02553-201ENST00000529088 SSUH2Q9Y2M2 353 aa16.09■□□□□ 0.17
LINC02553-201ENST00000529088 SPDYE1Q8NFV5 336 aaPredicted RBP16.03■□□□□ 0.16
LINC02553-201ENST00000529088 PRKAR2AP13861 404 aaKnown RBP15.97■□□□□ 0.15
LINC02553-201ENST00000529088 EVX2Q03828 476 aa15.97■□□□□ 0.15
LINC02553-201ENST00000529088 PABPN1Q86U42 306 aaKnown RBP eCLIP15.95■□□□□ 0.14
LINC02553-201ENST00000529088 CHADLQ6NUI6 762 aa15.87■□□□□ 0.13
LINC02553-201ENST00000529088 PRR29P0C7W0 189 aa15.78■□□□□ 0.12
LINC02553-201ENST00000529088 C19orf67A6NJJ6 358 aa15.69■□□□□ 0.1
LINC02553-201ENST00000529088 SPDYE4A6NLX3 237 aa15.55■□□□□ 0.08
LINC02553-201ENST00000529088 GABBR2O75899 941 aa15.52■□□□□ 0.08
LINC02553-201ENST00000529088 FARP1Q9Y4F1 1045 aaPredicted RBP15.52■□□□□ 0.08
LINC02553-201ENST00000529088 CD44P16070 742 aaKnown RBP15.45■□□□□ 0.06
LINC02553-201ENST00000529088 CREBZFQ9NS37 354 aa15.41■□□□□ 0.06
LINC02553-201ENST00000529088 STAG3Q9UJ98 1225 aa15.35■□□□□ 0.05
LINC02553-201ENST00000529088 ZRANB1Q9UGI0 708 aa15.25■□□□□ 0.03
LINC02553-201ENST00000529088 POTEIP0CG38 1075 aa15.24■□□□□ 0.03
LINC02553-201ENST00000529088 ZNF579Q8NAF0 562 aaKnown RBP15.15■□□□□ 0.02
LINC02553-201ENST00000529088 MNX1P50219 401 aaPredicted RBP15.14■□□□□ 0.01
LINC02553-201ENST00000529088 LHX8Q68G74 356 aa15.12■□□□□ 0.01
LINC02553-201ENST00000529088 PROM2Q8N271 834 aa15.1■□□□□ 0.01
LINC02553-201ENST00000529088 GALR2O43603 387 aaPredicted RBP15.09■□□□□ 0.01
LINC02553-201ENST00000529088 PHF12Q96QT6 1004 aa15.08■□□□□ 0
LINC02553-201ENST00000529088 DCBLD2Q96PD2 775 aa15.06■□□□□ 0
LINC02553-201ENST00000529088 NPM1P06748 294 aaKnown RBP eCLIP15.02■□□□□ -0
LINC02553-201ENST00000529088 CLCN6P51797 869 aa15.02■□□□□ -0
LINC02553-201ENST00000529088 PAK3O75914 559 aaPredicted RBP15.01□□□□□ -0.01
LINC02553-201ENST00000529088 TSPYL2Q9H2G4 693 aaPredicted RBP14.9□□□□□ -0.02
LINC02553-201ENST00000529088 MIER1Q8N108 512 aa14.86□□□□□ -0.03
LINC02553-201ENST00000529088 MS4A3Q96HJ5 214 aa14.84□□□□□ -0.03
LINC02553-201ENST00000529088 PELP1Q8IZL8 1130 aaKnown RBP14.82□□□□□ -0.04
LINC02553-201ENST00000529088 FKBP8Q14318 412 aa14.79□□□□□ -0.04
LINC02553-201ENST00000529088 POTEB2H3BUK9 544 aa14.77□□□□□ -0.05
LINC02553-201ENST00000529088 CCDC61Q9Y6R9 512 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms