Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.84□□□□□ -1.15
COL9A1P20849 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL9A1P20849 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.84□□□□□ -1.15
COL9A1P20849 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC7.84□□□□□ -1.15
COL9A1P20849 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC7.84□□□□□ -1.16
COL9A1P20849 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.16
COL9A1P20849 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
COL9A1P20849 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
COL9A1P20849 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
COL9A1P20849 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
COL9A1P20849 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
COL9A1P20849 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL9A1P20849 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL9A1P20849 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL9A1P20849 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC7.83□□□□□ -1.16
COL9A1P20849 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL9A1P20849 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
COL9A1P20849 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC7.83□□□□□ -1.16
COL9A1P20849 SNORA73B-201ENST00000363217 204 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.83□□□□□ -1.16
COL9A1P20849 RNU2-28P-201ENST00000410457 189 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 RN7SKP188-201ENST00000410789 317 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC7.83□□□□□ -1.16
COL9A1P20849 AL731534.1-201ENST00000434711 269 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 AL161722.2-201ENST00000434731 981 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.83□□□□□ -1.16
COL9A1P20849 AC083855.1-201ENST00000440041 258 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL9A1P20849 AL137074.1-201ENST00000442640 465 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 AC245291.3-201ENST00000443400 292 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC7.83□□□□□ -1.16
COL9A1P20849 OR7E62P-201ENST00000456741 477 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.83□□□□□ -1.16
COL9A1P20849 AC094085.1-201ENST00000468914 584 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 UBFD1P1-201ENST00000473259 814 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.83□□□□□ -1.16
COL9A1P20849 AC233724.10-201ENST00000510454 409 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 RNU6-273P-201ENST00000516937 96 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL9A1P20849 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC7.83□□□□□ -1.16
COL9A1P20849 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC7.83□□□□□ -1.16
COL9A1P20849 MIR3680-2-201ENST00000578247 87 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 MIR3680-1-201ENST00000581433 87 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 AC007136.1-201ENST00000589141 199 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC7.83□□□□□ -1.16
COL9A1P20849 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC7.83□□□□□ -1.16
COL9A1P20849 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.83□□□□□ -1.16
COL9A1P20849 AC012409.4-201ENST00000612923 249 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 ACACA-232ENST00000614438 569 ntTSL 2 BASIC7.83□□□□□ -1.16
COL9A1P20849 AC009237.17-201ENST00000618111 748 ntBASIC7.83□□□□□ -1.16
COL9A1P20849 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.83□□□□□ -1.16
COL9A1P20849 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL9A1P20849 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL9A1P20849 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL9A1P20849 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
COL9A1P20849 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL9A1P20849 IST1-226ENST00000606369 3583 ntTSL 2 BASIC7.83□□□□□ -1.16
COL9A1P20849 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL9A1P20849 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC7.83□□□□□ -1.16
COL9A1P20849 STXBP5L-208ENST00000497029 3036 ntTSL 5 BASIC7.83□□□□□ -1.16
COL9A1P20849 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL9A1P20849 ZNF23-202ENST00000358700 2692 ntTSL 5 BASIC7.83□□□□□ -1.16
COL9A1P20849 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
COL9A1P20849 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
COL9A1P20849 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
COL9A1P20849 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL9A1P20849 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
COL9A1P20849 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL9A1P20849 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL9A1P20849 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL9A1P20849 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
COL9A1P20849 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL9A1P20849 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL9A1P20849 ANKUB1-201ENST00000446160 2419 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
COL9A1P20849 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.82□□□□□ -1.16
COL9A1P20849 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL9A1P20849 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
COL9A1P20849 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC7.82□□□□□ -1.16
COL9A1P20849 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.82□□□□□ -1.16
COL9A1P20849 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL9A1P20849 TBX22-202ENST00000373296 2355 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
COL9A1P20849 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC7.82□□□□□ -1.16
COL9A1P20849 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC7.82□□□□□ -1.16
COL9A1P20849 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL9A1P20849 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
COL9A1P20849 OR10R3P-201ENST00000361688 942 ntBASIC7.82□□□□□ -1.16
COL9A1P20849 RN7SKP47-201ENST00000365347 328 ntBASIC7.82□□□□□ -1.16
COL9A1P20849 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL9A1P20849 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7.82□□□□□ -1.16
COL9A1P20849 RNU6-532P-201ENST00000384318 107 ntBASIC7.82□□□□□ -1.16
COL9A1P20849 SNORA68-201ENST00000384437 133 ntBASIC7.82□□□□□ -1.16
COL9A1P20849 AL360271.1-201ENST00000395679 510 ntBASIC7.82□□□□□ -1.16
COL9A1P20849 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC7.82□□□□□ -1.16
COL9A1P20849 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC7.82□□□□□ -1.16
COL9A1P20849 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC7.82□□□□□ -1.16
COL9A1P20849 AC007283.2-201ENST00000424739 197 ntBASIC7.82□□□□□ -1.16
COL9A1P20849 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.82□□□□□ -1.16
COL9A1P20849 PUDPP2-201ENST00000431423 643 ntBASIC7.82□□□□□ -1.16
COL9A1P20849 AC003989.1-201ENST00000434569 565 ntBASIC7.82□□□□□ -1.16
COL9A1P20849 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms