Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SLC10A6-201ENST00000273905 1502 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TEX28-204ENST00000619903 1549 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 DEPDC5-205ENST00000400248 5307 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 PART1-201ENST00000504876 5616 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TBC1D28-202ENST00000405044 1978 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC002101.1-201ENST00000564021 1990 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TBC1D26-213ENST00000612583 1978 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 PADI4-201ENST00000375448 2267 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 COPS4-206ENST00000509093 2273 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC010867.1-201ENST00000558038 2289 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AL031666.2-201ENST00000599904 2253 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 FAM181A-AS1-202ENST00000554742 2402 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 OR2AH1P-202ENST00000641232 2744 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TEX10-204ENST00000535814 3006 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 FAM13C-214ENST00000611933 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TGIF2-208ENST00000611732 3344 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CCDC25-201ENST00000356537 3626 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 IKZF5-205ENST00000617859 4542 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 NEK1-203ENST00000507142 5556 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 COL21A1-201ENST00000244728 4339 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 TRPV1-207ENST00000572705 4166 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 C1QTNF3-AMACR-201ENST00000382079 3424 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC01104-202ENST00000452354 3115 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 COMMD9-201ENST00000263401 2954 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC18A1-204ENST00000437980 2822 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 DLG1-205ENST00000392382 2690 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 NCAM1-202ENST00000401611 2510 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PRUNE1-203ENST00000368935 2238 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 SERPINA5-205ENST00000554276 2210 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 SERPINA5-208ENST00000554866 2211 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC010320.4-201ENST00000594379 1905 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ENO1P4-201ENST00000416471 1785 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC022710.1-201ENST00000560128 1781 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 EXOC2-201ENST00000230449 4449 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PIGR-201ENST00000356495 4279 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 STAU2-215ENST00000521727 3953 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF418-202ENST00000425570 3547 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ZFYVE1-203ENST00000553891 3244 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 BCO2-201ENST00000357685 2930 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 STK36-202ENST00000392105 4821 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC012377.1-202ENST00000558675 4811 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 IL18RAP-201ENST00000264260 2773 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 C12orf40-201ENST00000324616 2776 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 BMF-202ENST00000397573 4545 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 DDI1-201ENST00000302259 2609 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 MCTP1-204ENST00000505078 2629 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 MRAS-210ENST00000614350 4377 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ELF5-202ENST00000312319 2450 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PPP1R1A-202ENST00000547431 2491 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 DHX35-202ENST00000373323 2347 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RAD17-219ENST00000521422 2323 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 HM13-204ENST00000398174 3792 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RCAN1-204ENST00000399272 2164 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PIEZO1P2-201ENST00000416241 2180 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC28A1-204ENST00000538177 2155 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AL137186.2-201ENST00000397264 3486 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 SP100-206ENST00000409897 2037 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 KCND1-202ENST00000376477 3306 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 FBXO44-206ENST00000376770 3320 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 MERTK-202ENST00000409780 3189 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AKAP1-204ENST00000539273 3153 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC007406.5-201ENST00000570140 3170 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RAB7B-205ENST00000623893 1851 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ARHGAP44-201ENST00000262444 3001 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PLSCR4-202ENST00000383083 3033 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RHD-210ENST00000622561 3007 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 MAOA-201ENST00000338702 4015 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 LRRC7-201ENST00000035383 5000 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF45-201ENST00000269973 3898 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 SEC31A-228ENST00000509142 3861 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 TMEM52B-201ENST00000298530 2731 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 CCDC174-201ENST00000303688 2714 ntTSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms