Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RN7SL558P-201ENST00000497468 299 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 AC004241.3-201ENST00000611728 517 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMAP28067 FO681491.1-202ENST00000623392 737 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 AL683826.1-201ENST00000624104 627 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 AC010329.2-201ENST00000595195 2737 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMAP28067 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMAP28067 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMAP28067 AC092747.4-201ENST00000620519 1861 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 AC090181.3-201ENST00000624777 1514 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMAP28067 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMAP28067 VN2R3P-201ENST00000422626 1412 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 HSPD1P11-201ENST00000508643 1702 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DMAP28067 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DMAP28067 OR10J6P-201ENST00000289731 930 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 OR52B3P-201ENST00000314715 928 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 OR52B1P-201ENST00000316506 909 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 SNORA2.3-201ENST00000383920 135 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 MT-RNR1-201ENST00000389680 954 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DMAP28067 SDHDP6-201ENST00000414693 480 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 QRSL1P2-201ENST00000418582 964 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC110602.1-201ENST00000437414 318 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC011753.3-201ENST00000443436 406 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 TDGF1P1-201ENST00000445734 527 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC011476.1-201ENST00000466725 307 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 SIAH1P1-201ENST00000479411 923 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC111000.5-201ENST00000506559 1178 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 PGBD4P4-201ENST00000509673 613 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC006499.4-201ENST00000510947 694 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 CYCSP22-201ENST00000517555 339 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC012400.1-201ENST00000518452 381 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 HMGB1P40-201ENST00000525121 540 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC079600.1-201ENST00000550326 297 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 BLZF2P-201ENST00000553776 1130 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC090312.1-201ENST00000580637 348 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC000068.2-201ENST00000608816 460 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 MIR6813-201ENST00000621638 56 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 AC087190.4-201ENST00000574616 8334 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 AP001002.1-201ENST00000625148 1513 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 AL451142.2-201ENST00000429076 2090 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 AL445437.1-201ENST00000623157 3087 ntBASIC4.29□□□□□ -1.72
HLA-DMAP28067 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DMAP28067 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DMAP28067 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DMAP28067 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DMAP28067 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DMAP28067 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DMAP28067 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DMAP28067 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DMAP28067 PANDAR-201ENST00000629595 1506 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms