RNA–Protein interactions for RNA: ENST00000415082.1

SMIM2-IT1-201, SMIM2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMIM2-IT1, Length 478 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM2-IT1-201ENST00000415082 AEBP2Q6ZN18 517 aaPredicted RBP26.37■■□□□ 1.81
SMIM2-IT1-201ENST00000415082 CHIC1Q5VXU3 224 aa25.73■■□□□ 1.71
SMIM2-IT1-201ENST00000415082 PHF23Q9BUL5 403 aaPredicted RBP22.8■■□□□ 1.24
SMIM2-IT1-201ENST00000415082 SENP3Q9H4L4 574 aaPredicted RBP22.08■■□□□ 1.13
SMIM2-IT1-201ENST00000415082 PLPPR3Q6T4P5 718 aa20.84■□□□□ 0.93
SMIM2-IT1-201ENST00000415082 FOXD1Q16676 465 aa20.66■□□□□ 0.9
SMIM2-IT1-201ENST00000415082 PPP6R1Q9UPN7 881 aa20.1■□□□□ 0.81
SMIM2-IT1-201ENST00000415082 ADRA2BP18089 450 aa20.02■□□□□ 0.8
SMIM2-IT1-201ENST00000415082 PIAS4Q8N2W9 510 aaPredicted RBP19.39■□□□□ 0.69
SMIM2-IT1-201ENST00000415082 MSH5O43196 834 aa18.78■□□□□ 0.6
SMIM2-IT1-201ENST00000415082 PPP4R3CPQ6ZMV5 832 aa18.47■□□□□ 0.55
SMIM2-IT1-201ENST00000415082 KCNA4P22459 653 aa18.28■□□□□ 0.52
SMIM2-IT1-201ENST00000415082 MAPK8IP2Q13387 824 aaPredicted RBP18.17■□□□□ 0.5
SMIM2-IT1-201ENST00000415082 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
SMIM2-IT1-201ENST00000415082 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
SMIM2-IT1-201ENST00000415082 NCBP3Q53F19 620 aaKnown RBP17.85■□□□□ 0.45
SMIM2-IT1-201ENST00000415082 NPM3O75607 178 aaKnown RBP17.81■□□□□ 0.44
SMIM2-IT1-201ENST00000415082 DMRT2Q9Y5R5 561 aa17.73■□□□□ 0.43
SMIM2-IT1-201ENST00000415082 RNF216Q9NWF9 866 aaPredicted RBP17.49■□□□□ 0.39
SMIM2-IT1-201ENST00000415082 HOXD11P31277 338 aaPredicted RBP17.44■□□□□ 0.38
SMIM2-IT1-201ENST00000415082 SLC4A1APQ9BWU0 796 aaKnown RBP17.31■□□□□ 0.36
SMIM2-IT1-201ENST00000415082 DNAJC5BQ9UF47 199 aa17.22■□□□□ 0.35
SMIM2-IT1-201ENST00000415082 POTEDQ86YR6 584 aa17.03■□□□□ 0.32
SMIM2-IT1-201ENST00000415082 EHMT2Q96KQ7 1210 aa17.03■□□□□ 0.32
SMIM2-IT1-201ENST00000415082 ZBTB22O15209 634 aa16.92■□□□□ 0.3
SMIM2-IT1-201ENST00000415082 DCAF8L1A6NGE4 600 aa16.87■□□□□ 0.29
SMIM2-IT1-201ENST00000415082 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
SMIM2-IT1-201ENST00000415082 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
SMIM2-IT1-201ENST00000415082 FOXD4L1Q9NU39 408 aa16.65■□□□□ 0.26
SMIM2-IT1-201ENST00000415082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.23
SMIM2-IT1-201ENST00000415082 U3KPZ7 1027 aaPredicted RBP16.41■□□□□ 0.22
SMIM2-IT1-201ENST00000415082 MYCNP04198 464 aaPredicted RBP16.32■□□□□ 0.2
SMIM2-IT1-201ENST00000415082 RNF39Q9H2S5 420 aa16.24■□□□□ 0.19
SMIM2-IT1-201ENST00000415082 ATF5Q9Y2D1 282 aaPredicted RBP16.12■□□□□ 0.17
SMIM2-IT1-201ENST00000415082 ATXN8OSP0DMR3 200 aa16.02■□□□□ 0.16
SMIM2-IT1-201ENST00000415082 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
SMIM2-IT1-201ENST00000415082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
SMIM2-IT1-201ENST00000415082 HNRNPUL2Q1KMD3 747 aaKnown RBP15.97■□□□□ 0.15
SMIM2-IT1-201ENST00000415082 C1QBPQ07021 282 aaKnown RBP15.94■□□□□ 0.14
SMIM2-IT1-201ENST00000415082 SPINK5Q9NQ38 1064 aaPredicted RBP15.94■□□□□ 0.14
SMIM2-IT1-201ENST00000415082 CAPN15O75808 1086 aa15.71■□□□□ 0.11
SMIM2-IT1-201ENST00000415082 TRHP20396 242 aaPredicted RBP15.7■□□□□ 0.1
SMIM2-IT1-201ENST00000415082 APLP2Q06481 763 aa15.7■□□□□ 0.1
SMIM2-IT1-201ENST00000415082 ZNF219Q9P2Y4 722 aaPredicted RBP15.69■□□□□ 0.1
SMIM2-IT1-201ENST00000415082 CACNB1Q02641 598 aaPredicted RBP15.63■□□□□ 0.09
SMIM2-IT1-201ENST00000415082 ABCB7O75027 752 aa15.52■□□□□ 0.08
SMIM2-IT1-201ENST00000415082 DSG3P32926 999 aa15.52■□□□□ 0.08
SMIM2-IT1-201ENST00000415082 POLA2Q14181 598 aa15.52■□□□□ 0.08
SMIM2-IT1-201ENST00000415082 MKRN4PQ13434 485 aaPredicted RBP15.39■□□□□ 0.05
SMIM2-IT1-201ENST00000415082 FKBP8Q14318 412 aa15.13■□□□□ 0.01
SMIM2-IT1-201ENST00000415082 FBLN2P98095 1184 aa15.11■□□□□ 0.01
SMIM2-IT1-201ENST00000415082 ZBTB12Q9Y330 459 aaPredicted RBP15.06■□□□□ 0
SMIM2-IT1-201ENST00000415082 OSCARQ8IYS5 282 aa14.99□□□□□ -0.01
SMIM2-IT1-201ENST00000415082 SPDYE4A6NLX3 237 aa14.95□□□□□ -0.02
SMIM2-IT1-201ENST00000415082 PROM2Q8N271 834 aa14.83□□□□□ -0.04
SMIM2-IT1-201ENST00000415082 SPDYE2BA6NHP3 402 aa14.78□□□□□ -0.04
SMIM2-IT1-201ENST00000415082 SPDYE6P0CI01 402 aa14.78□□□□□ -0.04
SMIM2-IT1-201ENST00000415082 SPDYE2Q495Y8 402 aa14.78□□□□□ -0.04
SMIM2-IT1-201ENST00000415082 SSUH2Q9Y2M2 353 aa14.78□□□□□ -0.04
SMIM2-IT1-201ENST00000415082 ZNF692Q9BU19 519 aaPredicted RBP14.77□□□□□ -0.05
SMIM2-IT1-201ENST00000415082 PABPN1Q86U42 306 aaKnown RBP eCLIP14.62□□□□□ -0.07
SMIM2-IT1-201ENST00000415082 RBM42Q9BTD8 480 aaKnown RBP14.57□□□□□ -0.08
SMIM2-IT1-201ENST00000415082 AKT1S1Q96B36 256 aa14.53□□□□□ -0.08
SMIM2-IT1-201ENST00000415082 REM2Q8IYK8 340 aaPredicted RBP14.47□□□□□ -0.09
SMIM2-IT1-201ENST00000415082 FBXO3Q9UK99 471 aa14.39□□□□□ -0.11
SMIM2-IT1-201ENST00000415082 VASPP50552 380 aaPredicted RBP14.33□□□□□ -0.12
SMIM2-IT1-201ENST00000415082 PITPNM1O00562 1244 aa14.32□□□□□ -0.12
SMIM2-IT1-201ENST00000415082 SPDYE1Q8NFV5 336 aaPredicted RBP14.28□□□□□ -0.12
SMIM2-IT1-201ENST00000415082 STAG3Q9UJ98 1225 aa14.26□□□□□ -0.13
SMIM2-IT1-201ENST00000415082 CLEC11AQ9Y240 323 aa14.26□□□□□ -0.13
SMIM2-IT1-201ENST00000415082 IFNLR1Q8IU57 520 aaPredicted RBP14.25□□□□□ -0.13
SMIM2-IT1-201ENST00000415082 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
SMIM2-IT1-201ENST00000415082 MIER1Q8N108 512 aa14.13□□□□□ -0.15
SMIM2-IT1-201ENST00000415082 CREBZFQ9NS37 354 aa14.12□□□□□ -0.15
SMIM2-IT1-201ENST00000415082 RTN4Q9NQC3 1192 aaKnown RBP14.08□□□□□ -0.16
SMIM2-IT1-201ENST00000415082 PLCD3Q8N3E9 789 aa14.07□□□□□ -0.16
SMIM2-IT1-201ENST00000415082 MNX1P50219 401 aaPredicted RBP14.06□□□□□ -0.16
SMIM2-IT1-201ENST00000415082 CHRDL2Q6WN34 429 aa14.05□□□□□ -0.16
SMIM2-IT1-201ENST00000415082 FXR2P51116 673 aaKnown RBP eCLIP14.02□□□□□ -0.17
SMIM2-IT1-201ENST00000415082 CHADLQ6NUI6 762 aa14.02□□□□□ -0.17
SMIM2-IT1-201ENST00000415082 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
SMIM2-IT1-201ENST00000415082 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
SMIM2-IT1-201ENST00000415082 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
SMIM2-IT1-201ENST00000415082 SPOCK2Q92563 424 aa13.91□□□□□ -0.18
SMIM2-IT1-201ENST00000415082 PRKAR2AP13861 404 aaKnown RBP13.9□□□□□ -0.18
SMIM2-IT1-201ENST00000415082 NUBP1P53384 320 aa13.87□□□□□ -0.19
SMIM2-IT1-201ENST00000415082 PKD2Q13563 968 aa13.84□□□□□ -0.19
SMIM2-IT1-201ENST00000415082 PLEKHG5O94827 1062 aa13.83□□□□□ -0.2
SMIM2-IT1-201ENST00000415082 FARP1Q9Y4F1 1045 aaPredicted RBP13.83□□□□□ -0.2
SMIM2-IT1-201ENST00000415082 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
SMIM2-IT1-201ENST00000415082 RASEFQ8IZ41 740 aa13.79□□□□□ -0.2
SMIM2-IT1-201ENST00000415082 NPM1P06748 294 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMIM2-IT1-201ENST00000415082 CIZ1Q9ULV3 898 aaPredicted RBP13.67□□□□□ -0.22
SMIM2-IT1-201ENST00000415082 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
SMIM2-IT1-201ENST00000415082 TSPYL2Q9H2G4 693 aaPredicted RBP13.59□□□□□ -0.23
SMIM2-IT1-201ENST00000415082 ECM2O94769 699 aaPredicted RBP13.58□□□□□ -0.24
SMIM2-IT1-201ENST00000415082 RGL2O15211 777 aa13.57□□□□□ -0.24
SMIM2-IT1-201ENST00000415082 GSE1Q14687 1217 aa13.57□□□□□ -0.24
SMIM2-IT1-201ENST00000415082 FAM212AQ96EL1 285 aa13.57□□□□□ -0.24
SMIM2-IT1-201ENST00000415082 RNF25Q96BH1 459 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms