RNA–Protein interactions for RNA: ENST00000389939.2

MS4A1-202, Transcript of membrane spanning 4-domains A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A1, Length 3,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1-202ENST00000389939 AEBP2Q6ZN18 517 aaPredicted RBP9.2□□□□□ -0.94
MS4A1-202ENST00000389939 CHIC1Q5VXU3 224 aa8.87□□□□□ -0.99
MS4A1-202ENST00000389939 SENP3Q9H4L4 574 aaPredicted RBP8.18□□□□□ -1.1
MS4A1-202ENST00000389939 PELP1Q8IZL8 1130 aaKnown RBP7.87□□□□□ -1.15
MS4A1-202ENST00000389939 PHF23Q9BUL5 403 aaPredicted RBP7.86□□□□□ -1.15
MS4A1-202ENST00000389939 PPARGC1BQ86YN6 1023 aaKnown RBP7.81□□□□□ -1.16
MS4A1-202ENST00000389939 MYT1Q01538 1121 aa7.81□□□□□ -1.16
MS4A1-202ENST00000389939 POTEDQ86YR6 584 aa7.72□□□□□ -1.17
MS4A1-202ENST00000389939 PCGF6Q9BYE7 350 aa7.68□□□□□ -1.18
MS4A1-202ENST00000389939 TTBK1Q5TCY1 1321 aaPredicted RBP7.66□□□□□ -1.18
MS4A1-202ENST00000389939 HRCP23327 699 aa7.58□□□□□ -1.2
MS4A1-202ENST00000389939 SUPT5HO00267 1087 aaKnown RBP7.52□□□□□ -1.21
MS4A1-202ENST00000389939 FOXD1Q16676 465 aa7.49□□□□□ -1.21
MS4A1-202ENST00000389939 SCAF1Q9H7N4 1312 aaKnown RBP7.43□□□□□ -1.22
MS4A1-202ENST00000389939 MSH5O43196 834 aa7.42□□□□□ -1.22
MS4A1-202ENST00000389939 EHMT2Q96KQ7 1210 aa7.41□□□□□ -1.22
MS4A1-202ENST00000389939 SHROOM4Q9ULL8 1493 aa7.39□□□□□ -1.23
MS4A1-202ENST00000389939 YTHDC1Q96MU7 727 aaKnown RBP7.31□□□□□ -1.24
MS4A1-202ENST00000389939 GTF3C3Q9Y5Q9 886 aa7.27□□□□□ -1.25
MS4A1-202ENST00000389939 APLP2Q06481 763 aa7.23□□□□□ -1.25
MS4A1-202ENST00000389939 LOC105371045A0A1W2PR82 267 aa7.22□□□□□ -1.25
MS4A1-202ENST00000389939 NEUROD1Q13562 356 aa7.2□□□□□ -1.26
MS4A1-202ENST00000389939 ACIN1Q9UKV3 1341 aaKnown RBP7.12□□□□□ -1.27
MS4A1-202ENST00000389939 PRKCSHP14314 528 aaPredicted RBP7.11□□□□□ -1.27
MS4A1-202ENST00000389939 FAM9AQ8IZU1 332 aaPredicted RBP7.11□□□□□ -1.27
MS4A1-202ENST00000389939 BCL11AQ9H165 835 aa7.1□□□□□ -1.27
MS4A1-202ENST00000389939 CENPBP07199 599 aaPredicted RBP7.09□□□□□ -1.27
MS4A1-202ENST00000389939 DCAF8L2P0C7V8 631 aa7.09□□□□□ -1.27
MS4A1-202ENST00000389939 ERICH6Q7L0X2 663 aa7.05□□□□□ -1.28
MS4A1-202ENST00000389939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.04□□□□□ -1.28
MS4A1-202ENST00000389939 NISCHQ9Y2I1 1504 aa7.04□□□□□ -1.28
MS4A1-202ENST00000389939 TRIM26Q12899 539 aaPredicted RBP7.02□□□□□ -1.29
MS4A1-202ENST00000389939 SLC24A1O60721 1099 aa7.02□□□□□ -1.29
MS4A1-202ENST00000389939 CCER1Q8TC90 406 aaPredicted RBP7.02□□□□□ -1.29
MS4A1-202ENST00000389939 DIEXFQ68CQ4 756 aaKnown RBP6.99□□□□□ -1.29
MS4A1-202ENST00000389939 BCANQ96GW7 911 aa6.99□□□□□ -1.29
MS4A1-202ENST00000389939 MYO15BQ96JP2 1530 aa6.98□□□□□ -1.29
MS4A1-202ENST00000389939 ZEB1P37275 1124 aaPredicted RBP6.95□□□□□ -1.3
MS4A1-202ENST00000389939 CSRNP3Q8WYN3 585 aa6.92□□□□□ -1.3
MS4A1-202ENST00000389939 CCDC180Q9P1Z9 1646 aa6.88□□□□□ -1.31
MS4A1-202ENST00000389939 DAXXQ9UER7 740 aaPredicted RBP6.87□□□□□ -1.31
MS4A1-202ENST00000389939 PIAS4Q8N2W9 510 aaPredicted RBP6.87□□□□□ -1.31
MS4A1-202ENST00000389939 ANP32EQ9BTT0 268 aa6.84□□□□□ -1.31
MS4A1-202ENST00000389939 CCDC136Q96JN2 1154 aa6.82□□□□□ -1.32
MS4A1-202ENST00000389939 MIER1Q8N108 512 aa6.8□□□□□ -1.32
MS4A1-202ENST00000389939 DCAF1Q9Y4B6 1507 aa6.8□□□□□ -1.32
MS4A1-202ENST00000389939 ITGAEP38570 1179 aa6.78□□□□□ -1.32
MS4A1-202ENST00000389939 RTN4Q9NQC3 1192 aaKnown RBP6.78□□□□□ -1.32
MS4A1-202ENST00000389939 ANO8Q9HCE9 1232 aaPredicted RBP6.76□□□□□ -1.33
MS4A1-202ENST00000389939 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.74□□□□□ -1.33
MS4A1-202ENST00000389939 TSHZ2Q9NRE2 1034 aa6.73□□□□□ -1.33
MS4A1-202ENST00000389939 RANGAP1P46060 587 aaPredicted RBP6.71□□□□□ -1.33
MS4A1-202ENST00000389939 HNRNPUL2Q1KMD3 747 aaKnown RBP6.71□□□□□ -1.34
MS4A1-202ENST00000389939 EIF5BO60841 1220 aaKnown RBP6.7□□□□□ -1.34
MS4A1-202ENST00000389939 NBR1Q14596 966 aa6.7□□□□□ -1.34
MS4A1-202ENST00000389939 TRIM41Q8WV44 630 aa6.69□□□□□ -1.34
MS4A1-202ENST00000389939 SUPT16HQ9Y5B9 1047 aaKnown RBP6.69□□□□□ -1.34
MS4A1-202ENST00000389939 ZNF316A6NFI3 1004 aaPredicted RBP6.68□□□□□ -1.34
MS4A1-202ENST00000389939 FKBP8Q14318 412 aa6.68□□□□□ -1.34
MS4A1-202ENST00000389939 PLPPR3Q6T4P5 718 aa6.68□□□□□ -1.34
MS4A1-202ENST00000389939 IRX6P78412 446 aaPredicted RBP6.65□□□□□ -1.34
MS4A1-202ENST00000389939 SALL2Q9Y467 1007 aaPredicted RBP6.63□□□□□ -1.35
MS4A1-202ENST00000389939 NEFLP07196 543 aa6.62□□□□□ -1.35
MS4A1-202ENST00000389939 CNGB1Q14028 1251 aaPredicted RBP6.61□□□□□ -1.35
MS4A1-202ENST00000389939 UBE2Q2Q8WVN8 375 aa6.6□□□□□ -1.35
MS4A1-202ENST00000389939 RBM19Q9Y4C8 960 aaKnown RBP6.6□□□□□ -1.35
MS4A1-202ENST00000389939 DEKP35659 375 aaKnown RBP6.58□□□□□ -1.36
MS4A1-202ENST00000389939 KCNH8Q96L42 1107 aa6.58□□□□□ -1.36
MS4A1-202ENST00000389939 TRIM52Q96A61 297 aa6.58□□□□□ -1.36
MS4A1-202ENST00000389939 SENP3-EIF4A1A0A087X0R7 540 aa6.55□□□□□ -1.36
MS4A1-202ENST00000389939 CLSPNQ9HAW4 1339 aa6.54□□□□□ -1.36
MS4A1-202ENST00000389939 PPP6R1Q9UPN7 881 aa6.54□□□□□ -1.36
MS4A1-202ENST00000389939 HIRIP3Q9BW71 556 aaPredicted RBP6.53□□□□□ -1.36
MS4A1-202ENST00000389939 IL27Q8NEV9 243 aa6.51□□□□□ -1.37
MS4A1-202ENST00000389939 ADRA2BP18089 450 aa6.51□□□□□ -1.37
MS4A1-202ENST00000389939 RTL5Q5HYW3 569 aaPredicted RBP6.5□□□□□ -1.37
MS4A1-202ENST00000389939 NPM2Q86SE8 214 aaKnown RBP6.49□□□□□ -1.37
MS4A1-202ENST00000389939 UBTFP17480 764 aaKnown RBP6.48□□□□□ -1.37
MS4A1-202ENST00000389939 TIMELESSQ9UNS1 1208 aa6.48□□□□□ -1.37
MS4A1-202ENST00000389939 CDK11AQ9UQ88 783 aaPredicted RBP6.47□□□□□ -1.37
MS4A1-202ENST00000389939 DDX10Q13206 875 aaKnown RBP6.46□□□□□ -1.38
MS4A1-202ENST00000389939 ERICH6BQ5W0A0 696 aa6.45□□□□□ -1.38
MS4A1-202ENST00000389939 ARXQ96QS3 562 aa6.45□□□□□ -1.38
MS4A1-202ENST00000389939 PLEKHG5O94827 1062 aa6.43□□□□□ -1.38
MS4A1-202ENST00000389939 LAS1LQ9Y4W2 734 aaKnown RBP6.43□□□□□ -1.38
MS4A1-202ENST00000389939 CACNB1Q02641 598 aaPredicted RBP6.42□□□□□ -1.38
MS4A1-202ENST00000389939 ARID4BQ4LE39 1312 aaPredicted RBP6.42□□□□□ -1.38
MS4A1-202ENST00000389939 DMRT2Q9Y5R5 561 aa6.41□□□□□ -1.38
MS4A1-202ENST00000389939 MYT1LQ9UL68 1186 aa6.41□□□□□ -1.38
MS4A1-202ENST00000389939 B4GALNT3Q6L9W6 998 aa6.39□□□□□ -1.39
MS4A1-202ENST00000389939 PAK3O75914 559 aaPredicted RBP6.38□□□□□ -1.39
MS4A1-202ENST00000389939 A0A0U1RQG5 324 aaPredicted RBP6.36□□□□□ -1.39
MS4A1-202ENST00000389939 HNRNPUQ00839 825 aaKnown RBP eCLIP6.36□□□□□ -1.39
MS4A1-202ENST00000389939 PKNOX2Q96KN3 472 aa6.34□□□□□ -1.39
MS4A1-202ENST00000389939 POLR3GLQ9BT43 218 aa6.34□□□□□ -1.39
MS4A1-202ENST00000389939 NCBP3Q53F19 620 aaKnown RBP6.34□□□□□ -1.39
MS4A1-202ENST00000389939 VSIG10Q8N0Z9 540 aa6.34□□□□□ -1.39
MS4A1-202ENST00000389939 NOP58Q9Y2X3 529 aaKnown RBP6.34□□□□□ -1.4
MS4A1-202ENST00000389939 BRPF3Q9ULD4 1205 aa6.33□□□□□ -1.4
MS4A1-202ENST00000389939 ZBTB47Q9UFB7 747 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms