Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 U3.32-201ENST00000408116 212 ntBASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 BNIP3P35-201ENST00000604530 490 ntBASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 AC007159.1-201ENST00000566529 4706 ntBASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 ARL4AP5-201ENST00000404372 599 ntBASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 MTND2P40-201ENST00000436718 841 ntBASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 GMPSP1-201ENST00000514075 579 ntBASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 AC022726.1-201ENST00000587475 207 ntBASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 MIR8059-201ENST00000620427 81 ntBASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 AL035246.1-201ENST00000433554 1255 ntBASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 FTH1P16-201ENST00000435241 552 ntBASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 PRELID3BP6-201ENST00000503839 571 ntBASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 VN1R105P-201ENST00000486595 910 ntBASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 IMPA1P1-201ENST00000510718 842 ntBASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CSMD1Q96PZ7 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CSMD1Q96PZ7 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CSMD1Q96PZ7 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AP001267.4-201ENST00000602598 545 ntBASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AC012468.1-201ENST00000604888 430 ntBASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 FAM27B-201ENST00000610601 213 ntBASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 NACA-203ENST00000454682 6629 ntTSL 5 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AC007967.1-201ENST00000455422 1159 ntBASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AC105137.1-201ENST00000484355 562 ntBASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms