Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 OTX2P1-201ENST00000450956 354 ntBASIC4.95□□□□□ -1.62
SNX3O60493 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNX3O60493 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNX3O60493 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.95□□□□□ -1.62
SNX3O60493 AC015864.1-201ENST00000496512 544 ntBASIC4.95□□□□□ -1.62
SNX3O60493 HMGB1P3-201ENST00000502802 616 ntBASIC4.95□□□□□ -1.62
SNX3O60493 MTCO1P31-201ENST00000506355 492 ntBASIC4.95□□□□□ -1.62
SNX3O60493 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.95□□□□□ -1.62
SNX3O60493 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.95□□□□□ -1.62
SNX3O60493 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX3O60493 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX3O60493 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.95□□□□□ -1.62
SNX3O60493 AC079075.1-201ENST00000559543 878 ntBASIC4.95□□□□□ -1.62
SNX3O60493 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.95□□□□□ -1.62
SNX3O60493 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.95□□□□□ -1.62
SNX3O60493 SNX6P1-201ENST00000601728 1224 ntBASIC4.95□□□□□ -1.62
SNX3O60493 MTCO2P22-201ENST00000603246 681 ntBASIC4.95□□□□□ -1.62
SNX3O60493 AP004372.1-201ENST00000604842 844 ntBASIC4.95□□□□□ -1.62
SNX3O60493 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX3O60493 AC234782.5-201ENST00000617723 324 ntBASIC4.95□□□□□ -1.62
SNX3O60493 AC132068.1-201ENST00000623805 459 ntBASIC4.95□□□□□ -1.62
SNX3O60493 AC092159.4-201ENST00000624944 550 ntBASIC4.95□□□□□ -1.62
SNX3O60493 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX3O60493 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SNX3O60493 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SNX3O60493 LYARP1-201ENST00000436977 1501 ntBASIC4.95□□□□□ -1.62
SNX3O60493 AC017002.4-201ENST00000604721 1525 ntBASIC4.95□□□□□ -1.62
SNX3O60493 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX3O60493 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SNX3O60493 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX3O60493 AC009643.2-201ENST00000603543 1448 ntBASIC4.95□□□□□ -1.62
SNX3O60493 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX3O60493 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.95□□□□□ -1.62
SNX3O60493 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNX3O60493 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SNX3O60493 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SNX3O60493 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SNX3O60493 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SNX3O60493 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX3O60493 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX3O60493 HSPA8P18-201ENST00000439846 1928 ntBASIC4.94□□□□□ -1.62
SNX3O60493 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SNX3O60493 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX3O60493 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX3O60493 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX3O60493 U3.3-201ENST00000362986 216 ntBASIC4.94□□□□□ -1.62
SNX3O60493 SNORD51.1-201ENST00000365405 77 ntBASIC4.94□□□□□ -1.62
SNX3O60493 RNA5SP372-201ENST00000390836 115 ntBASIC4.94□□□□□ -1.62
SNX3O60493 SNORA40.4-201ENST00000390971 128 ntBASIC4.94□□□□□ -1.62
SNX3O60493 GAPDHP15-201ENST00000398586 975 ntBASIC4.94□□□□□ -1.62
SNX3O60493 AL034417.1-201ENST00000399343 800 ntBASIC4.94□□□□□ -1.62
SNX3O60493 AL034403.1-201ENST00000399414 885 ntBASIC4.94□□□□□ -1.62
SNX3O60493 AL391422.1-201ENST00000402155 436 ntBASIC4.94□□□□□ -1.62
SNX3O60493 AL356057.1-202ENST00000402263 756 ntBASIC4.94□□□□□ -1.62
SNX3O60493 RNA5SP296-201ENST00000410523 111 ntBASIC4.94□□□□□ -1.62
SNX3O60493 AC004448.2-201ENST00000422360 586 ntBASIC4.94□□□□□ -1.62
SNX3O60493 MTND4P24-201ENST00000424002 397 ntBASIC4.94□□□□□ -1.62
SNX3O60493 MTND4LP13-201ENST00000425022 298 ntBASIC4.94□□□□□ -1.62
SNX3O60493 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX3O60493 RPL17P35-201ENST00000432217 549 ntBASIC4.94□□□□□ -1.62
SNX3O60493 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX3O60493 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX3O60493 AL353718.1-201ENST00000451028 517 ntBASIC4.94□□□□□ -1.62
SNX3O60493 AC069277.2-201ENST00000454211 432 ntBASIC4.94□□□□□ -1.62
SNX3O60493 EIF2S2P5-201ENST00000457635 968 ntBASIC4.94□□□□□ -1.62
SNX3O60493 RN7SL799P-201ENST00000475891 298 ntBASIC4.94□□□□□ -1.62
SNX3O60493 RPL23AP37-201ENST00000479658 549 ntBASIC4.94□□□□□ -1.62
SNX3O60493 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.94□□□□□ -1.62
SNX3O60493 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX3O60493 AC021146.7-201ENST00000509604 775 ntBASIC4.94□□□□□ -1.62
SNX3O60493 AC018797.1-201ENST00000510791 255 ntBASIC4.94□□□□□ -1.62
SNX3O60493 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX3O60493 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX3O60493 AC074087.1-201ENST00000512059 724 ntBASIC4.94□□□□□ -1.62
SNX3O60493 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX3O60493 RN7SKP99-201ENST00000517028 307 ntBASIC4.94□□□□□ -1.62
SNX3O60493 HMGB1P46-201ENST00000520062 610 ntBASIC4.94□□□□□ -1.62
SNX3O60493 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX3O60493 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.94□□□□□ -1.62
SNX3O60493 MIR3908-201ENST00000579798 126 ntBASIC4.94□□□□□ -1.62
SNX3O60493 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX3O60493 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX3O60493 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX3O60493 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX3O60493 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX3O60493 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SNX3O60493 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SNX3O60493 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX3O60493 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SNX3O60493 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX3O60493 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX3O60493 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX3O60493 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.94□□□□□ -1.62
SNX3O60493 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX3O60493 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX3O60493 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SNX3O60493 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX3O60493 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX3O60493 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX3O60493 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms