RNA–Protein interactions for RNA: ENST00000432217.1

RPL17P35-201, Transcript of ribosomal protein L17 pseudogene 35, humanhuman

BASIC

Gene RPL17P35, Length 549 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17P35-201ENST00000432217 AEBP2Q6ZN18 517 aaPredicted RBP28.79■■■□□ 2.2
RPL17P35-201ENST00000432217 CHIC1Q5VXU3 224 aa28.33■■■□□ 2.13
RPL17P35-201ENST00000432217 PHF23Q9BUL5 403 aaPredicted RBP24.93■■□□□ 1.58
RPL17P35-201ENST00000432217 SENP3Q9H4L4 574 aaPredicted RBP24.41■■□□□ 1.5
RPL17P35-201ENST00000432217 PLPPR3Q6T4P5 718 aa23.1■■□□□ 1.29
RPL17P35-201ENST00000432217 FOXD1Q16676 465 aa22.61■■□□□ 1.21
RPL17P35-201ENST00000432217 PPP6R1Q9UPN7 881 aa21.93■■□□□ 1.1
RPL17P35-201ENST00000432217 ADRA2BP18089 450 aa21.92■■□□□ 1.1
RPL17P35-201ENST00000432217 PIAS4Q8N2W9 510 aaPredicted RBP21.37■■□□□ 1.01
RPL17P35-201ENST00000432217 MSH5O43196 834 aa20.79■□□□□ 0.92
RPL17P35-201ENST00000432217 PPP4R3CPQ6ZMV5 832 aa20.38■□□□□ 0.85
RPL17P35-201ENST00000432217 KCNA4P22459 653 aa20.13■□□□□ 0.81
RPL17P35-201ENST00000432217 SCAF1Q9H7N4 1312 aaKnown RBP20.07■□□□□ 0.8
RPL17P35-201ENST00000432217 NCBP3Q53F19 620 aaKnown RBP19.92■□□□□ 0.78
RPL17P35-201ENST00000432217 MAPK8IP2Q13387 824 aaPredicted RBP19.83■□□□□ 0.77
RPL17P35-201ENST00000432217 CNKSR2Q8WXI2 1034 aa19.77■□□□□ 0.76
RPL17P35-201ENST00000432217 NPM3O75607 178 aaKnown RBP19.6■□□□□ 0.73
RPL17P35-201ENST00000432217 DMRT2Q9Y5R5 561 aa19.51■□□□□ 0.71
RPL17P35-201ENST00000432217 RNF216Q9NWF9 866 aaPredicted RBP19.33■□□□□ 0.68
RPL17P35-201ENST00000432217 SLC4A1APQ9BWU0 796 aaKnown RBP19.21■□□□□ 0.67
RPL17P35-201ENST00000432217 HOXD11P31277 338 aaPredicted RBP19.2■□□□□ 0.66
RPL17P35-201ENST00000432217 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
RPL17P35-201ENST00000432217 EHMT2Q96KQ7 1210 aa18.88■□□□□ 0.61
RPL17P35-201ENST00000432217 DCAF8L1A6NGE4 600 aa18.65■□□□□ 0.58
RPL17P35-201ENST00000432217 CSRNP3Q8WYN3 585 aa18.6■□□□□ 0.57
RPL17P35-201ENST00000432217 POTEDQ86YR6 584 aa18.56■□□□□ 0.56
RPL17P35-201ENST00000432217 ZBTB22O15209 634 aa18.52■□□□□ 0.56
RPL17P35-201ENST00000432217 FOXD4L1Q9NU39 408 aa18.48■□□□□ 0.55
RPL17P35-201ENST00000432217 SLC4A2P04920 1241 aa18.46■□□□□ 0.55
RPL17P35-201ENST00000432217 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.29■□□□□ 0.52
RPL17P35-201ENST00000432217 MYCNP04198 464 aaPredicted RBP18.12■□□□□ 0.49
RPL17P35-201ENST00000432217 U3KPZ7 1027 aaPredicted RBP18.01■□□□□ 0.47
RPL17P35-201ENST00000432217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.87■□□□□ 0.45
RPL17P35-201ENST00000432217 HNRNPUL2Q1KMD3 747 aaKnown RBP17.87■□□□□ 0.45
RPL17P35-201ENST00000432217 ATXN8OSP0DMR3 200 aa17.83■□□□□ 0.44
RPL17P35-201ENST00000432217 RNF39Q9H2S5 420 aa17.83■□□□□ 0.44
RPL17P35-201ENST00000432217 SAMD1Q6SPF0 538 aaPredicted RBP17.82■□□□□ 0.44
RPL17P35-201ENST00000432217 APLP2Q06481 763 aa17.64■□□□□ 0.41
RPL17P35-201ENST00000432217 C1QBPQ07021 282 aaKnown RBP17.64■□□□□ 0.41
RPL17P35-201ENST00000432217 ATF5Q9Y2D1 282 aaPredicted RBP17.61■□□□□ 0.41
RPL17P35-201ENST00000432217 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
RPL17P35-201ENST00000432217 CAPN15O75808 1086 aa17.37■□□□□ 0.37
RPL17P35-201ENST00000432217 ZNF219Q9P2Y4 722 aaPredicted RBP17.35■□□□□ 0.37
RPL17P35-201ENST00000432217 TRHP20396 242 aaPredicted RBP17.34■□□□□ 0.37
RPL17P35-201ENST00000432217 CACNB1Q02641 598 aaPredicted RBP17.22■□□□□ 0.35
RPL17P35-201ENST00000432217 POLA2Q14181 598 aa17.1■□□□□ 0.33
RPL17P35-201ENST00000432217 ABCB7O75027 752 aa17.05■□□□□ 0.32
RPL17P35-201ENST00000432217 DSG3P32926 999 aa17.03■□□□□ 0.32
RPL17P35-201ENST00000432217 FBLN2P98095 1184 aa16.88■□□□□ 0.29
RPL17P35-201ENST00000432217 MKRN4PQ13434 485 aaPredicted RBP16.85■□□□□ 0.29
RPL17P35-201ENST00000432217 ZBTB12Q9Y330 459 aaPredicted RBP16.85■□□□□ 0.29
RPL17P35-201ENST00000432217 FKBP8Q14318 412 aa16.79■□□□□ 0.28
RPL17P35-201ENST00000432217 SPDYE4A6NLX3 237 aa16.58■□□□□ 0.24
RPL17P35-201ENST00000432217 OSCARQ8IYS5 282 aa16.51■□□□□ 0.23
RPL17P35-201ENST00000432217 SPDYE2BA6NHP3 402 aa16.42■□□□□ 0.22
RPL17P35-201ENST00000432217 SPDYE6P0CI01 402 aa16.42■□□□□ 0.22
RPL17P35-201ENST00000432217 SPDYE2Q495Y8 402 aa16.42■□□□□ 0.22
RPL17P35-201ENST00000432217 ZNF692Q9BU19 519 aaPredicted RBP16.38■□□□□ 0.21
RPL17P35-201ENST00000432217 PROM2Q8N271 834 aa16.34■□□□□ 0.21
RPL17P35-201ENST00000432217 SSUH2Q9Y2M2 353 aa16.31■□□□□ 0.2
RPL17P35-201ENST00000432217 RBM42Q9BTD8 480 aaKnown RBP16.24■□□□□ 0.19
RPL17P35-201ENST00000432217 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
RPL17P35-201ENST00000432217 FBXO3Q9UK99 471 aa16.16■□□□□ 0.18
RPL17P35-201ENST00000432217 AKT1S1Q96B36 256 aa16.09■□□□□ 0.17
RPL17P35-201ENST00000432217 STAG3Q9UJ98 1225 aa15.96■□□□□ 0.15
RPL17P35-201ENST00000432217 VASPP50552 380 aaPredicted RBP15.92■□□□□ 0.14
RPL17P35-201ENST00000432217 REM2Q8IYK8 340 aaPredicted RBP15.92■□□□□ 0.14
RPL17P35-201ENST00000432217 SPDYE1Q8NFV5 336 aaPredicted RBP15.89■□□□□ 0.13
RPL17P35-201ENST00000432217 CLEC11AQ9Y240 323 aa15.78■□□□□ 0.12
RPL17P35-201ENST00000432217 PITPNM1O00562 1244 aa15.72■□□□□ 0.11
RPL17P35-201ENST00000432217 IFNLR1Q8IU57 520 aaPredicted RBP15.71■□□□□ 0.11
RPL17P35-201ENST00000432217 MIER1Q8N108 512 aa15.71■□□□□ 0.11
RPL17P35-201ENST00000432217 PLCD3Q8N3E9 789 aa15.71■□□□□ 0.11
RPL17P35-201ENST00000432217 PRR29P0C7W0 189 aa15.69■□□□□ 0.1
RPL17P35-201ENST00000432217 AMER1Q5JTC6 1135 aaPredicted RBP15.67■□□□□ 0.1
RPL17P35-201ENST00000432217 PLEKHG5O94827 1062 aa15.62■□□□□ 0.09
RPL17P35-201ENST00000432217 KLHL34Q8N239 644 aa15.61■□□□□ 0.09
RPL17P35-201ENST00000432217 RTN4Q9NQC3 1192 aaKnown RBP15.61■□□□□ 0.09
RPL17P35-201ENST00000432217 CREBZFQ9NS37 354 aa15.53■□□□□ 0.08
RPL17P35-201ENST00000432217 ZBTB47Q9UFB7 747 aaPredicted RBP15.52■□□□□ 0.08
RPL17P35-201ENST00000432217 SPOCK2Q92563 424 aa15.51■□□□□ 0.07
RPL17P35-201ENST00000432217 CHRDL2Q6WN34 429 aa15.46■□□□□ 0.07
RPL17P35-201ENST00000432217 FXR2P51116 673 aaKnown RBP eCLIP15.41■□□□□ 0.06
RPL17P35-201ENST00000432217 MNX1P50219 401 aaPredicted RBP15.39■□□□□ 0.05
RPL17P35-201ENST00000432217 CHADLQ6NUI6 762 aa15.37■□□□□ 0.05
RPL17P35-201ENST00000432217 PRKAR2AP13861 404 aaKnown RBP15.34■□□□□ 0.05
RPL17P35-201ENST00000432217 PIP4P2Q8N4L2 257 aa15.32■□□□□ 0.04
RPL17P35-201ENST00000432217 NPM1P06748 294 aaKnown RBP eCLIP15.29■□□□□ 0.04
RPL17P35-201ENST00000432217 NUBP1P53384 320 aa15.29■□□□□ 0.04
RPL17P35-201ENST00000432217 PKD2Q13563 968 aa15.27■□□□□ 0.04
RPL17P35-201ENST00000432217 FARP1Q9Y4F1 1045 aaPredicted RBP15.27■□□□□ 0.04
RPL17P35-201ENST00000432217 CIZ1Q9ULV3 898 aaPredicted RBP15.22■□□□□ 0.03
RPL17P35-201ENST00000432217 GSE1Q14687 1217 aa15.18■□□□□ 0.02
RPL17P35-201ENST00000432217 DCAF8Q5TAQ9 597 aa15.17■□□□□ 0.02
RPL17P35-201ENST00000432217 RASEFQ8IZ41 740 aa15.16■□□□□ 0.02
RPL17P35-201ENST00000432217 FAM212AQ96EL1 285 aa15.15■□□□□ 0.02
RPL17P35-201ENST00000432217 ECM2O94769 699 aaPredicted RBP15.13■□□□□ 0.01
RPL17P35-201ENST00000432217 TRIM41Q8WV44 630 aa15.1■□□□□ 0.01
RPL17P35-201ENST00000432217 TSPYL2Q9H2G4 693 aaPredicted RBP15.03■□□□□ -0
RPL17P35-201ENST00000432217 RGL2O15211 777 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms