RNA–Protein interactions for RNA: ENST00000604842.1

AP004372.1-201, humanhuman

BASIC

Gene AP004372.1, Length 844 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004372.1-201ENST00000604842 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
AP004372.1-201ENST00000604842 AEBP2Q6ZN18 517 aaPredicted RBP19.68■□□□□ 0.74
AP004372.1-201ENST00000604842 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
AP004372.1-201ENST00000604842 SENP3Q9H4L4 574 aaPredicted RBP16.5■□□□□ 0.23
AP004372.1-201ENST00000604842 PLPPR3Q6T4P5 718 aa16.36■□□□□ 0.21
AP004372.1-201ENST00000604842 ADRA2BP18089 450 aa15.53■□□□□ 0.08
AP004372.1-201ENST00000604842 FOXD1Q16676 465 aa15.37■□□□□ 0.05
AP004372.1-201ENST00000604842 PPP6R1Q9UPN7 881 aa15.33■□□□□ 0.04
AP004372.1-201ENST00000604842 KCNA4P22459 653 aa15.22■□□□□ 0.03
AP004372.1-201ENST00000604842 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
AP004372.1-201ENST00000604842 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
AP004372.1-201ENST00000604842 CSRNP3Q8WYN3 585 aa14.55□□□□□ -0.08
AP004372.1-201ENST00000604842 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
AP004372.1-201ENST00000604842 PIAS4Q8N2W9 510 aaPredicted RBP14.52□□□□□ -0.09
AP004372.1-201ENST00000604842 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
AP004372.1-201ENST00000604842 MSH5O43196 834 aa14.26□□□□□ -0.13
AP004372.1-201ENST00000604842 NPM3O75607 178 aaKnown RBP14.26□□□□□ -0.13
AP004372.1-201ENST00000604842 ZBTB22O15209 634 aa14.09□□□□□ -0.15
AP004372.1-201ENST00000604842 CNKSR2Q8WXI2 1034 aa13.94□□□□□ -0.18
AP004372.1-201ENST00000604842 SCAF1Q9H7N4 1312 aaKnown RBP13.75□□□□□ -0.21
AP004372.1-201ENST00000604842 MAPK8IP2Q13387 824 aaPredicted RBP13.73□□□□□ -0.21
AP004372.1-201ENST00000604842 FOXD4L1Q9NU39 408 aa13.67□□□□□ -0.22
AP004372.1-201ENST00000604842 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
AP004372.1-201ENST00000604842 DNAJC5BQ9UF47 199 aa13.54□□□□□ -0.24
AP004372.1-201ENST00000604842 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
AP004372.1-201ENST00000604842 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
AP004372.1-201ENST00000604842 SLC4A2P04920 1241 aa13.32□□□□□ -0.28
AP004372.1-201ENST00000604842 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
AP004372.1-201ENST00000604842 DMRT2Q9Y5R5 561 aa13.23□□□□□ -0.29
AP004372.1-201ENST00000604842 SLC24A1O60721 1099 aa13.19□□□□□ -0.3
AP004372.1-201ENST00000604842 AMER1Q5JTC6 1135 aaPredicted RBP13.15□□□□□ -0.3
AP004372.1-201ENST00000604842 FKBP8Q14318 412 aa13.08□□□□□ -0.32
AP004372.1-201ENST00000604842 MYCNP04198 464 aaPredicted RBP13.07□□□□□ -0.32
AP004372.1-201ENST00000604842 ATXN8OSP0DMR3 200 aa13.01□□□□□ -0.33
AP004372.1-201ENST00000604842 ATF5Q9Y2D1 282 aaPredicted RBP12.86□□□□□ -0.35
AP004372.1-201ENST00000604842 DCAF8L1A6NGE4 600 aa12.66□□□□□ -0.38
AP004372.1-201ENST00000604842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.62□□□□□ -0.39
AP004372.1-201ENST00000604842 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
AP004372.1-201ENST00000604842 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
AP004372.1-201ENST00000604842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
AP004372.1-201ENST00000604842 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
AP004372.1-201ENST00000604842 ZNF219Q9P2Y4 722 aaPredicted RBP12.4□□□□□ -0.42
AP004372.1-201ENST00000604842 MKRN4PQ13434 485 aaPredicted RBP12.3□□□□□ -0.44
AP004372.1-201ENST00000604842 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
AP004372.1-201ENST00000604842 RNF39Q9H2S5 420 aa12.22□□□□□ -0.45
AP004372.1-201ENST00000604842 FBXO3Q9UK99 471 aa12.21□□□□□ -0.45
AP004372.1-201ENST00000604842 PROM2Q8N271 834 aa12.19□□□□□ -0.46
AP004372.1-201ENST00000604842 PLCB2Q00722 1185 aa12.18□□□□□ -0.46
AP004372.1-201ENST00000604842 VASPP50552 380 aaPredicted RBP12.17□□□□□ -0.46
AP004372.1-201ENST00000604842 IFNLR1Q8IU57 520 aaPredicted RBP12.12□□□□□ -0.47
AP004372.1-201ENST00000604842 APLP2Q06481 763 aa12.1□□□□□ -0.47
AP004372.1-201ENST00000604842 CACNB1Q02641 598 aaPredicted RBP12.09□□□□□ -0.47
AP004372.1-201ENST00000604842 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
AP004372.1-201ENST00000604842 DCAF8L2P0C7V8 631 aa12.06□□□□□ -0.48
AP004372.1-201ENST00000604842 HAP1P54257 671 aaPredicted RBP12.05□□□□□ -0.48
AP004372.1-201ENST00000604842 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
AP004372.1-201ENST00000604842 FBLN2P98095 1184 aa12.02□□□□□ -0.49
AP004372.1-201ENST00000604842 C1QBPQ07021 282 aaKnown RBP12.02□□□□□ -0.49
AP004372.1-201ENST00000604842 PKD2Q13563 968 aa12.02□□□□□ -0.49
AP004372.1-201ENST00000604842 POLA2Q14181 598 aa12□□□□□ -0.49
AP004372.1-201ENST00000604842 CAPN15O75808 1086 aa11.88□□□□□ -0.51
AP004372.1-201ENST00000604842 PRKCSHP14314 528 aaPredicted RBP11.88□□□□□ -0.51
AP004372.1-201ENST00000604842 ABCB7O75027 752 aa11.82□□□□□ -0.52
AP004372.1-201ENST00000604842 NPM1P06748 294 aaKnown RBP eCLIP11.8□□□□□ -0.52
AP004372.1-201ENST00000604842 BCANQ96GW7 911 aa11.79□□□□□ -0.52
AP004372.1-201ENST00000604842 VSIG10Q8N0Z9 540 aa11.76□□□□□ -0.53
AP004372.1-201ENST00000604842 KDM2AQ9Y2K7 1162 aa11.76□□□□□ -0.53
AP004372.1-201ENST00000604842 ECM2O94769 699 aaPredicted RBP11.75□□□□□ -0.53
AP004372.1-201ENST00000604842 SPOCK2Q92563 424 aa11.75□□□□□ -0.53
AP004372.1-201ENST00000604842 KLHL34Q8N239 644 aa11.74□□□□□ -0.53
AP004372.1-201ENST00000604842 TAOK2Q9UL54 1235 aa11.73□□□□□ -0.53
AP004372.1-201ENST00000604842 PAXIP1Q6ZW49 1069 aaPredicted RBP11.7□□□□□ -0.54
AP004372.1-201ENST00000604842 BBXQ8WY36 941 aaPredicted RBP11.7□□□□□ -0.54
AP004372.1-201ENST00000604842 RGL2O15211 777 aa11.69□□□□□ -0.54
AP004372.1-201ENST00000604842 CFAP44Q96MT7 982 aa11.68□□□□□ -0.54
AP004372.1-201ENST00000604842 ZBTB12Q9Y330 459 aaPredicted RBP11.68□□□□□ -0.54
AP004372.1-201ENST00000604842 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.54
AP004372.1-201ENST00000604842 ZNF692Q9BU19 519 aaPredicted RBP11.63□□□□□ -0.55
AP004372.1-201ENST00000604842 OSCARQ8IYS5 282 aa11.62□□□□□ -0.55
AP004372.1-201ENST00000604842 TPRNQ4KMQ1 711 aa11.59□□□□□ -0.55
AP004372.1-201ENST00000604842 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
AP004372.1-201ENST00000604842 TSHZ2Q9NRE2 1034 aa11.58□□□□□ -0.56
AP004372.1-201ENST00000604842 SSUH2Q9Y2M2 353 aa11.57□□□□□ -0.56
AP004372.1-201ENST00000604842 STAG3Q9UJ98 1225 aa11.56□□□□□ -0.56
AP004372.1-201ENST00000604842 PABPN1Q86U42 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
AP004372.1-201ENST00000604842 DSG3P32926 999 aa11.53□□□□□ -0.56
AP004372.1-201ENST00000604842 MIER1Q8N108 512 aa11.53□□□□□ -0.56
AP004372.1-201ENST00000604842 SPDYE2BA6NHP3 402 aa11.5□□□□□ -0.57
AP004372.1-201ENST00000604842 SPDYE6P0CI01 402 aa11.5□□□□□ -0.57
AP004372.1-201ENST00000604842 SPDYE2Q495Y8 402 aa11.5□□□□□ -0.57
AP004372.1-201ENST00000604842 SPRYD3Q8NCJ5 442 aa11.49□□□□□ -0.57
AP004372.1-201ENST00000604842 CHGAP10645 457 aaKnown RBP11.48□□□□□ -0.57
AP004372.1-201ENST00000604842 CIZ1Q9ULV3 898 aaPredicted RBP11.48□□□□□ -0.57
AP004372.1-201ENST00000604842 RNF25Q96BH1 459 aaPredicted RBP11.37□□□□□ -0.59
AP004372.1-201ENST00000604842 DNAJC5Q9H3Z4 198 aa11.34□□□□□ -0.59
AP004372.1-201ENST00000604842 HS6ST3Q8IZP7 471 aa11.33□□□□□ -0.6
AP004372.1-201ENST00000604842 NKX1-1Q15270 411 aaPredicted RBP11.28□□□□□ -0.6
AP004372.1-201ENST00000604842 ZBTB47Q9UFB7 747 aaPredicted RBP11.28□□□□□ -0.6
AP004372.1-201ENST00000604842 PLEKHG5O94827 1062 aa11.27□□□□□ -0.61
AP004372.1-201ENST00000604842 NBR1Q14596 966 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms