Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SWT1-201ENST00000367500 3830 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 PXN-206ENST00000458477 3807 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 SNAP25-AS1-207ENST00000603542 3207 ntTSL 2 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 RNF123-201ENST00000327697 4311 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 REN-201ENST00000272190 1447 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 PPFIBP2-224ENST00000533792 3003 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 LRRC4C-201ENST00000278198 4054 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AC139099.4-201ENST00000625083 3504 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 SLC4A1AP-204ENST00000613058 2966 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 TRPM3-202ENST00000357533 5145 ntTSL 5 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 CHRNB1-208ENST00000576360 1837 ntTSL 3 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 CLIP1-213ENST00000540338 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 LINC02067-201ENST00000473595 2845 ntTSL 2 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 MROH8-203ENST00000400441 3345 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 CACNA2D4-223ENST00000588077 3311 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 PCMTD2-203ENST00000308824 3843 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 RNU6-1141P-201ENST00000364520 107 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 RNU1-140P-201ENST00000365040 165 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 SLAMF9-202ENST00000368093 1156 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 JPT2-203ENST00000382711 894 ntTSL 4 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 RNU6-729P-201ENST00000384399 107 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 RNU6-816P-201ENST00000390914 107 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 RNU6-1268P-201ENST00000391214 107 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 RNU6-1239P-201ENST00000391310 107 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 RPLP0P6-201ENST00000394878 954 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 RHBDD1-203ENST00000409053 538 ntTSL 4 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 EIF4A1P3-201ENST00000411521 244 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 TMEM91-204ENST00000413014 650 ntTSL 2 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AL591503.3-201ENST00000423038 635 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AL645939.1-201ENST00000453429 797 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AC022730.2-201ENST00000465359 452 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AC108865.1-201ENST00000507644 496 ntTSL 3 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AC067904.1-201ENST00000522530 1225 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AC140847.3-201ENST00000542491 708 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AC013489.2-201ENST00000558732 276 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 RN7SL217P-201ENST00000584520 286 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 PTOV1-AS2-201ENST00000593654 596 ntTSL 2 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AL451007.1-201ENST00000595491 289 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 YPEL5P2-201ENST00000605553 359 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 RPL12P48-201ENST00000605620 304 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AC131159.2-201ENST00000613236 702 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 HOTTIP_2.1-201ENST00000616633 376 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 COL5A2-203ENST00000618828 6399 ntTSL 5 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AC015912.3-201ENST00000619432 348 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 NID2-201ENST00000216286 4811 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 ANKRD18B-201ENST00000290943 3773 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AL133367.1-201ENST00000568177 4063 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AC104083.1-201ENST00000569449 2615 ntBASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 CDH26-203ENST00000350849 2494 ntTSL 2 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 BNC2-202ENST00000380667 3361 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 PTK2B-203ENST00000397501 4719 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 QRICH2-201ENST00000262765 5357 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 OVCH2-201ENST00000533663 1921 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 PLXNA3-201ENST00000369682 10885 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF526-201ENST00000301215 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 AK2-215ENST00000629371 3576 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 SEMA4A-201ENST00000355014 3137 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 NUP85-210ENST00000579298 1890 ntTSL 5 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 SMPD4P1-201ENST00000416717 2263 ntBASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 LINC00608-201ENST00000419101 2254 ntTSL 5 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 ACTN1-203ENST00000394419 3464 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 SORBS2-231ENST00000449407 3049 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 DUOX1-211ENST00000561166 4539 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 SEMA4A-204ENST00000368285 3300 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 CHML-201ENST00000366553 7594 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 CTAGE5-214ENST00000556148 2526 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 CHEK1-213ENST00000532449 4051 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 NSUN7-202ENST00000381782 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP3-3Q9BYR6 VTA1-205ENST00000620996 3272 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms