RNA–Protein interactions for RNA: ENST00000357533.6

TRPM3-202, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 5 BASIC

Gene TRPM3, Length 5,145 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-202ENST00000357533 NISCHQ9Y2I1 1504 aa19.37■□□□□ 0.69
TRPM3-202ENST00000357533 SUPT5HO00267 1087 aaKnown RBP18.33■□□□□ 0.52
TRPM3-202ENST00000357533 DCAF8L2P0C7V8 631 aa18.22■□□□□ 0.51
TRPM3-202ENST00000357533 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
TRPM3-202ENST00000357533 PCGF6Q9BYE7 350 aa17.71■□□□□ 0.42
TRPM3-202ENST00000357533 EHMT2Q96KQ7 1210 aa17.39■□□□□ 0.37
TRPM3-202ENST00000357533 HRCP23327 699 aa17.39■□□□□ 0.37
TRPM3-202ENST00000357533 PPARGC1BQ86YN6 1023 aaKnown RBP17.21■□□□□ 0.35
TRPM3-202ENST00000357533 CHIC1Q5VXU3 224 aa17.15■□□□□ 0.34
TRPM3-202ENST00000357533 FAM9AQ8IZU1 332 aaPredicted RBP17.15■□□□□ 0.34
TRPM3-202ENST00000357533 LOC105371045A0A1W2PR82 267 aa17.04■□□□□ 0.32
TRPM3-202ENST00000357533 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
TRPM3-202ENST00000357533 TRIM26Q12899 539 aaPredicted RBP16.92■□□□□ 0.3
TRPM3-202ENST00000357533 PELP1Q8IZL8 1130 aaKnown RBP16.89■□□□□ 0.29
TRPM3-202ENST00000357533 TTBK1Q5TCY1 1321 aaPredicted RBP16.87■□□□□ 0.29
TRPM3-202ENST00000357533 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
TRPM3-202ENST00000357533 CCER1Q8TC90 406 aaPredicted RBP16.76■□□□□ 0.27
TRPM3-202ENST00000357533 CENPBP07199 599 aaPredicted RBP16.68■□□□□ 0.26
TRPM3-202ENST00000357533 YTHDC1Q96MU7 727 aaKnown RBP16.53■□□□□ 0.24
TRPM3-202ENST00000357533 MYO15BQ96JP2 1530 aa16.53■□□□□ 0.24
TRPM3-202ENST00000357533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
TRPM3-202ENST00000357533 APLP2Q06481 763 aa16.4■□□□□ 0.22
TRPM3-202ENST00000357533 RANGAP1P46060 587 aaPredicted RBP16.34■□□□□ 0.21
TRPM3-202ENST00000357533 UBTFP17480 764 aaKnown RBP16.33■□□□□ 0.2
TRPM3-202ENST00000357533 DCAF1Q9Y4B6 1507 aa16.31■□□□□ 0.2
TRPM3-202ENST00000357533 DIEXFQ68CQ4 756 aaKnown RBP16.31■□□□□ 0.2
TRPM3-202ENST00000357533 MYT1Q01538 1121 aa16.31■□□□□ 0.2
TRPM3-202ENST00000357533 GTF3C3Q9Y5Q9 886 aa16.27■□□□□ 0.19
TRPM3-202ENST00000357533 ZCCHC6Q5VYS8 1495 aaKnown RBP16.25■□□□□ 0.19
TRPM3-202ENST00000357533 SCAF1Q9H7N4 1312 aaKnown RBP16.23■□□□□ 0.19
TRPM3-202ENST00000357533 ACIN1Q9UKV3 1341 aaKnown RBP16.18■□□□□ 0.18
TRPM3-202ENST00000357533 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
TRPM3-202ENST00000357533 NEUROD1Q13562 356 aa16.07■□□□□ 0.16
TRPM3-202ENST00000357533 ZNF316A6NFI3 1004 aaPredicted RBP15.93■□□□□ 0.14
TRPM3-202ENST00000357533 CCDC180Q9P1Z9 1646 aa15.89■□□□□ 0.14
TRPM3-202ENST00000357533 ITGAEP38570 1179 aa15.86■□□□□ 0.13
TRPM3-202ENST00000357533 NEFLP07196 543 aa15.83■□□□□ 0.13
TRPM3-202ENST00000357533 ERICH6Q7L0X2 663 aa15.82■□□□□ 0.12
TRPM3-202ENST00000357533 ATP1B4Q9UN42 357 aaPredicted RBP15.81■□□□□ 0.12
TRPM3-202ENST00000357533 BCANQ96GW7 911 aa15.71■□□□□ 0.1
TRPM3-202ENST00000357533 SCRIBQ14160 1630 aa15.7■□□□□ 0.1
TRPM3-202ENST00000357533 MIER1Q8N108 512 aa15.68■□□□□ 0.1
TRPM3-202ENST00000357533 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
TRPM3-202ENST00000357533 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
TRPM3-202ENST00000357533 ABCC9O60706 1549 aa15.63■□□□□ 0.09
TRPM3-202ENST00000357533 PABPN1Q86U42 306 aaKnown RBP eCLIP15.48■□□□□ 0.07
TRPM3-202ENST00000357533 CEP162Q5TB80 1403 aa15.43■□□□□ 0.06
TRPM3-202ENST00000357533 FAM50AQ14320 339 aaKnown RBP15.42■□□□□ 0.06
TRPM3-202ENST00000357533 RB1CC1Q8TDY2 1594 aa15.4■□□□□ 0.06
TRPM3-202ENST00000357533 CNGB1Q14028 1251 aaPredicted RBP15.39■□□□□ 0.05
TRPM3-202ENST00000357533 FKBP8Q14318 412 aa15.39■□□□□ 0.05
TRPM3-202ENST00000357533 ANP32CO43423 234 aa15.33■□□□□ 0.05
TRPM3-202ENST00000357533 CLSPNQ9HAW4 1339 aa15.33■□□□□ 0.04
TRPM3-202ENST00000357533 CECR2Q9BXF3 1484 aa15.32■□□□□ 0.04
TRPM3-202ENST00000357533 DDX10Q13206 875 aaKnown RBP15.32■□□□□ 0.04
TRPM3-202ENST00000357533 POLR3GLQ9BT43 218 aa15.3■□□□□ 0.04
TRPM3-202ENST00000357533 TNIKQ9UKE5 1360 aa15.27■□□□□ 0.04
TRPM3-202ENST00000357533 CLIP1P30622 1438 aa15.26■□□□□ 0.03
TRPM3-202ENST00000357533 TRIM52Q96A61 297 aa15.25■□□□□ 0.03
TRPM3-202ENST00000357533 SUPT16HQ9Y5B9 1047 aaKnown RBP15.25■□□□□ 0.03
TRPM3-202ENST00000357533 CDK11AQ9UQ88 783 aaPredicted RBP15.24■□□□□ 0.03
TRPM3-202ENST00000357533 SOGA1O94964 1423 aa15.23■□□□□ 0.03
TRPM3-202ENST00000357533 HIRIP3Q9BW71 556 aaPredicted RBP15.21■□□□□ 0.03
TRPM3-202ENST00000357533 P3H3Q8IVL6 736 aa15.2■□□□□ 0.02
TRPM3-202ENST00000357533 GOLGA3Q08378 1498 aa15.19■□□□□ 0.02
TRPM3-202ENST00000357533 ANP32EQ9BTT0 268 aa15.19■□□□□ 0.02
TRPM3-202ENST00000357533 MROH2BQ7Z745 1585 aa15.16■□□□□ 0.02
TRPM3-202ENST00000357533 EEA1Q15075 1411 aa15.14■□□□□ 0.01
TRPM3-202ENST00000357533 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
TRPM3-202ENST00000357533 ABCC8Q09428 1581 aa15.13■□□□□ 0.01
TRPM3-202ENST00000357533 HNRNPUQ00839 825 aaKnown RBP eCLIP15.11■□□□□ 0.01
TRPM3-202ENST00000357533 IRX6P78412 446 aaPredicted RBP15.11■□□□□ 0.01
TRPM3-202ENST00000357533 RTL5Q5HYW3 569 aaPredicted RBP15.1■□□□□ 0.01
TRPM3-202ENST00000357533 WRNQ14191 1432 aaPredicted RBP eCLIP15.07■□□□□ 0
TRPM3-202ENST00000357533 TSHZ2Q9NRE2 1034 aa15.04■□□□□ -0
TRPM3-202ENST00000357533 CEP164Q9UPV0 1460 aa15.02■□□□□ -0
TRPM3-202ENST00000357533 WIZO95785 1651 aa15.02□□□□□ -0.01
TRPM3-202ENST00000357533 TONSLQ96HA7 1378 aa15.01□□□□□ -0.01
TRPM3-202ENST00000357533 SIN3AQ96ST3 1273 aa15□□□□□ -0.01
TRPM3-202ENST00000357533 FAM9BQ8IZU0 186 aa14.98□□□□□ -0.01
TRPM3-202ENST00000357533 DAXXQ9UER7 740 aaPredicted RBP14.98□□□□□ -0.01
TRPM3-202ENST00000357533 BAZ1AQ9NRL2 1556 aaPredicted RBP14.97□□□□□ -0.01
TRPM3-202ENST00000357533 ZNF326Q5BKZ1 582 aaKnown RBP14.97□□□□□ -0.01
TRPM3-202ENST00000357533 BCL11AQ9H165 835 aa14.95□□□□□ -0.02
TRPM3-202ENST00000357533 RUSC2Q8N2Y8 1516 aa14.95□□□□□ -0.02
TRPM3-202ENST00000357533 KCNH8Q96L42 1107 aa14.95□□□□□ -0.02
TRPM3-202ENST00000357533 KANK4Q5T7N3 995 aaPredicted RBP14.95□□□□□ -0.02
TRPM3-202ENST00000357533 NACADO15069 1562 aa14.94□□□□□ -0.02
TRPM3-202ENST00000357533 VPS8Q8N3P4 1428 aa14.94□□□□□ -0.02
TRPM3-202ENST00000357533 NBR1Q14596 966 aa14.93□□□□□ -0.02
TRPM3-202ENST00000357533 RBM19Q9Y4C8 960 aaKnown RBP14.92□□□□□ -0.02
TRPM3-202ENST00000357533 ARID3CA6NKF2 412 aa14.9□□□□□ -0.02
TRPM3-202ENST00000357533 NPM2Q86SE8 214 aaKnown RBP14.88□□□□□ -0.03
TRPM3-202ENST00000357533 ANP32AP39687 249 aaKnown RBP14.88□□□□□ -0.03
TRPM3-202ENST00000357533 CHIC2Q9UKJ5 165 aa14.85□□□□□ -0.03
TRPM3-202ENST00000357533 CCNB3Q8WWL7 1395 aa14.85□□□□□ -0.03
TRPM3-202ENST00000357533 MRS2Q9HD23 443 aa14.84□□□□□ -0.03
TRPM3-202ENST00000357533 DHX57Q6P158 1386 aaKnown RBP14.83□□□□□ -0.04
TRPM3-202ENST00000357533 SENP3-EIF4A1A0A087X0R7 540 aa14.81□□□□□ -0.04
TRPM3-202ENST00000357533 CCDC136Q96JN2 1154 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms