Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 AL672167.1-203ENST00000641299 2975 ntBASIC4.47□□□□□ -1.69
CCDC58Q4VC31 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.46□□□□□ -1.69
CCDC58Q4VC31 AC068446.1-201ENST00000556425 1549 ntBASIC4.46□□□□□ -1.69
CCDC58Q4VC31 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.46□□□□□ -1.69
CCDC58Q4VC31 SCARNA15-201ENST00000607520 4325 ntBASIC4.46□□□□□ -1.69
CCDC58Q4VC31 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC58Q4VC31 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 Z98755.1-201ENST00000407015 1384 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 RNA5SP502-201ENST00000362694 119 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 RNA5SP234-201ENST00000363916 119 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 SNORD96B-201ENST00000386148 79 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 RNA5SP339-201ENST00000390987 122 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 AL603766.1-201ENST00000407763 664 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 MIR1182-201ENST00000408363 97 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 MORN2-202ENST00000409077 465 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 AL356968.2-201ENST00000412769 1257 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 EIF4EP1-201ENST00000422311 642 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 SUMO2P3-201ENST00000438311 288 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 TXNP5-201ENST00000441043 315 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 APOOP2-201ENST00000461561 539 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 RPS6P4-201ENST00000494693 758 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 OR51K1P-201ENST00000510214 950 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 GTF2F2P1-201ENST00000511083 675 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 AC074087.1-201ENST00000512059 724 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 AC005868.1-201ENST00000536421 331 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 RPL10P14-201ENST00000565265 298 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 CYCSP40-201ENST00000575927 294 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 AL356121.2-201ENST00000624715 780 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 AC139713.2-215ENST00000641428 5037 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 CASC19-206ENST00000641028 1430 ntBASIC4.46□□□□□ -1.7
CCDC58Q4VC31 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC58Q4VC31 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AL359922.3-201ENST00000624779 1670 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 RNU1-149P-201ENST00000390870 161 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AL050305.1-201ENST00000399993 1230 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 FABP7P1-201ENST00000424004 391 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 CKS1BP6-201ENST00000424932 240 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 RN7SL517P-201ENST00000462240 305 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 RN7SL809P-201ENST00000482040 297 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AC093270.2-201ENST00000486157 792 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 Vault.2-201ENST00000516519 98 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AC090281.1-201ENST00000523019 276 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 NANOGNBP2-201ENST00000544753 553 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 OR1F2P-201ENST00000570470 933 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms