RNA–Protein interactions for RNA: ENST00000390870.1

RNU1-149P-201, Transcript of RNA, U1 small nuclear 149, pseudogene, humanhuman

BASIC

Gene RNU1-149P, Length 161 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-149P-201ENST00000390870 CHIC1Q5VXU3 224 aa16.96■□□□□ 0.31
RNU1-149P-201ENST00000390870 AEBP2Q6ZN18 517 aaPredicted RBP16.96■□□□□ 0.31
RNU1-149P-201ENST00000390870 PHF23Q9BUL5 403 aaPredicted RBP14.95□□□□□ -0.02
RNU1-149P-201ENST00000390870 SENP3Q9H4L4 574 aaPredicted RBP14.35□□□□□ -0.11
RNU1-149P-201ENST00000390870 PLPPR3Q6T4P5 718 aa13.97□□□□□ -0.17
RNU1-149P-201ENST00000390870 FOXD1Q16676 465 aa13.26□□□□□ -0.29
RNU1-149P-201ENST00000390870 ADRA2BP18089 450 aa13.11□□□□□ -0.31
RNU1-149P-201ENST00000390870 PPP6R1Q9UPN7 881 aa13.07□□□□□ -0.32
RNU1-149P-201ENST00000390870 NISCHQ9Y2I1 1504 aa12.94□□□□□ -0.34
RNU1-149P-201ENST00000390870 PIAS4Q8N2W9 510 aaPredicted RBP12.64□□□□□ -0.39
RNU1-149P-201ENST00000390870 KCNA4P22459 653 aa12.54□□□□□ -0.4
RNU1-149P-201ENST00000390870 PPP4R3CPQ6ZMV5 832 aa12.36□□□□□ -0.43
RNU1-149P-201ENST00000390870 NCBP3Q53F19 620 aaKnown RBP12.18□□□□□ -0.46
RNU1-149P-201ENST00000390870 EHMT2Q96KQ7 1210 aa12.18□□□□□ -0.46
RNU1-149P-201ENST00000390870 MSH5O43196 834 aa12.08□□□□□ -0.48
RNU1-149P-201ENST00000390870 SLC4A1APQ9BWU0 796 aaKnown RBP12.03□□□□□ -0.48
RNU1-149P-201ENST00000390870 SCAF1Q9H7N4 1312 aaKnown RBP12□□□□□ -0.49
RNU1-149P-201ENST00000390870 NPM3O75607 178 aaKnown RBP11.97□□□□□ -0.49
RNU1-149P-201ENST00000390870 CNKSR2Q8WXI2 1034 aa11.93□□□□□ -0.5
RNU1-149P-201ENST00000390870 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
RNU1-149P-201ENST00000390870 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.53
RNU1-149P-201ENST00000390870 RNF216Q9NWF9 866 aaPredicted RBP11.58□□□□□ -0.56
RNU1-149P-201ENST00000390870 CCDC180Q9P1Z9 1646 aa11.56□□□□□ -0.56
RNU1-149P-201ENST00000390870 ZBTB22O15209 634 aa11.52□□□□□ -0.57
RNU1-149P-201ENST00000390870 DMRT2Q9Y5R5 561 aa11.51□□□□□ -0.57
RNU1-149P-201ENST00000390870 DNAJC5BQ9UF47 199 aa11.5□□□□□ -0.57
RNU1-149P-201ENST00000390870 FOXD4L1Q9NU39 408 aa11.42□□□□□ -0.58
RNU1-149P-201ENST00000390870 HOXD11P31277 338 aaPredicted RBP11.41□□□□□ -0.58
RNU1-149P-201ENST00000390870 ABCC9O60706 1549 aa11.3□□□□□ -0.6
RNU1-149P-201ENST00000390870 SLC4A2P04920 1241 aa11.19□□□□□ -0.62
RNU1-149P-201ENST00000390870 DCAF8L1A6NGE4 600 aa11.06□□□□□ -0.64
RNU1-149P-201ENST00000390870 MYCNP04198 464 aaPredicted RBP11.06□□□□□ -0.64
RNU1-149P-201ENST00000390870 ATXN8OSP0DMR3 200 aa10.97□□□□□ -0.65
RNU1-149P-201ENST00000390870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.94□□□□□ -0.66
RNU1-149P-201ENST00000390870 RB1CC1Q8TDY2 1594 aa10.86□□□□□ -0.67
RNU1-149P-201ENST00000390870 DCAF8L2P0C7V8 631 aa10.85□□□□□ -0.67
RNU1-149P-201ENST00000390870 NACADO15069 1562 aa10.83□□□□□ -0.68
RNU1-149P-201ENST00000390870 ZCCHC6Q5VYS8 1495 aaKnown RBP10.8□□□□□ -0.68
RNU1-149P-201ENST00000390870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.79□□□□□ -0.68
RNU1-149P-201ENST00000390870 HNRNPUL2Q1KMD3 747 aaKnown RBP10.79□□□□□ -0.68
RNU1-149P-201ENST00000390870 SAMD1Q6SPF0 538 aaPredicted RBP10.77□□□□□ -0.69
RNU1-149P-201ENST00000390870 U3KPZ7 1027 aaPredicted RBP10.77□□□□□ -0.69
RNU1-149P-201ENST00000390870 ATF5Q9Y2D1 282 aaPredicted RBP10.73□□□□□ -0.69
RNU1-149P-201ENST00000390870 MYO15BQ96JP2 1530 aa10.72□□□□□ -0.69
RNU1-149P-201ENST00000390870 DCAF1Q9Y4B6 1507 aa10.68□□□□□ -0.7
RNU1-149P-201ENST00000390870 FKBP8Q14318 412 aa10.68□□□□□ -0.7
RNU1-149P-201ENST00000390870 UNC13AQ9UPW8 1703 aa10.66□□□□□ -0.7
RNU1-149P-201ENST00000390870 APLP2Q06481 763 aa10.59□□□□□ -0.71
RNU1-149P-201ENST00000390870 SCRIBQ14160 1630 aa10.58□□□□□ -0.72
RNU1-149P-201ENST00000390870 ZNF219Q9P2Y4 722 aaPredicted RBP10.53□□□□□ -0.72
RNU1-149P-201ENST00000390870 PABPN1Q86U42 306 aaKnown RBP eCLIP10.52□□□□□ -0.73
RNU1-149P-201ENST00000390870 BICRAQ9NZM4 1560 aa10.5□□□□□ -0.73
RNU1-149P-201ENST00000390870 AMER1Q5JTC6 1135 aaPredicted RBP10.43□□□□□ -0.74
RNU1-149P-201ENST00000390870 RTN4Q9NQC3 1192 aaKnown RBP10.41□□□□□ -0.74
RNU1-149P-201ENST00000390870 SHROOM4Q9ULL8 1493 aa10.39□□□□□ -0.75
RNU1-149P-201ENST00000390870 TRHP20396 242 aaPredicted RBP10.39□□□□□ -0.75
RNU1-149P-201ENST00000390870 RNF39Q9H2S5 420 aa10.38□□□□□ -0.75
RNU1-149P-201ENST00000390870 SPINK5Q9NQ38 1064 aaPredicted RBP10.36□□□□□ -0.75
RNU1-149P-201ENST00000390870 CAPN15O75808 1086 aa10.33□□□□□ -0.76
RNU1-149P-201ENST00000390870 FBLN2P98095 1184 aa10.29□□□□□ -0.76
RNU1-149P-201ENST00000390870 POLA2Q14181 598 aa10.29□□□□□ -0.76
RNU1-149P-201ENST00000390870 POTEDQ86YR6 584 aa10.29□□□□□ -0.76
RNU1-149P-201ENST00000390870 C1QBPQ07021 282 aaKnown RBP10.28□□□□□ -0.76
RNU1-149P-201ENST00000390870 SPDYE4A6NLX3 237 aa10.27□□□□□ -0.77
RNU1-149P-201ENST00000390870 MKRN4PQ13434 485 aaPredicted RBP10.27□□□□□ -0.77
RNU1-149P-201ENST00000390870 EIF4G1Q04637 1599 aaKnown RBP10.26□□□□□ -0.77
RNU1-149P-201ENST00000390870 CC2D2AQ9P2K1 1620 aa10.22□□□□□ -0.77
RNU1-149P-201ENST00000390870 FBXO3Q9UK99 471 aa10.18□□□□□ -0.78
RNU1-149P-201ENST00000390870 ABCB7O75027 752 aa10.17□□□□□ -0.78
RNU1-149P-201ENST00000390870 ZBTB12Q9Y330 459 aaPredicted RBP10.14□□□□□ -0.79
RNU1-149P-201ENST00000390870 CECR2Q9BXF3 1484 aa10.13□□□□□ -0.79
RNU1-149P-201ENST00000390870 PROM2Q8N271 834 aa10.1□□□□□ -0.79
RNU1-149P-201ENST00000390870 SMARCA4P51532 1647 aa10.08□□□□□ -0.8
RNU1-149P-201ENST00000390870 SLC24A1O60721 1099 aa10.08□□□□□ -0.8
RNU1-149P-201ENST00000390870 BAZ1AQ9NRL2 1556 aaPredicted RBP10.06□□□□□ -0.8
RNU1-149P-201ENST00000390870 DSG3P32926 999 aa10.02□□□□□ -0.81
RNU1-149P-201ENST00000390870 VASPP50552 380 aaPredicted RBP10.02□□□□□ -0.81
RNU1-149P-201ENST00000390870 SMARCA2P51531 1590 aa10□□□□□ -0.81
RNU1-149P-201ENST00000390870 MROH2BQ7Z745 1585 aa9.99□□□□□ -0.81
RNU1-149P-201ENST00000390870 ATAD2BQ9ULI0 1458 aa9.98□□□□□ -0.81
RNU1-149P-201ENST00000390870 HMGXB3Q12766 1538 aa9.96□□□□□ -0.82
RNU1-149P-201ENST00000390870 NCAPD3P42695 1498 aa9.95□□□□□ -0.82
RNU1-149P-201ENST00000390870 PEG3Q9GZU2 1588 aa9.94□□□□□ -0.82
RNU1-149P-201ENST00000390870 BAZ1BQ9UIG0 1483 aaKnown RBP9.94□□□□□ -0.82
RNU1-149P-201ENST00000390870 ZNF692Q9BU19 519 aaPredicted RBP9.94□□□□□ -0.82
RNU1-149P-201ENST00000390870 OSCARQ8IYS5 282 aa9.92□□□□□ -0.82
RNU1-149P-201ENST00000390870 WIZO95785 1651 aa9.92□□□□□ -0.82
RNU1-149P-201ENST00000390870 IFNLR1Q8IU57 520 aaPredicted RBP9.9□□□□□ -0.82
RNU1-149P-201ENST00000390870 SPDYE2BA6NHP3 402 aa9.89□□□□□ -0.83
RNU1-149P-201ENST00000390870 SPDYE6P0CI01 402 aa9.89□□□□□ -0.83
RNU1-149P-201ENST00000390870 SPDYE2Q495Y8 402 aa9.89□□□□□ -0.83
RNU1-149P-201ENST00000390870 CACNB1Q02641 598 aaPredicted RBP9.86□□□□□ -0.83
RNU1-149P-201ENST00000390870 RSF1Q96T23 1441 aaPredicted RBP9.85□□□□□ -0.83
RNU1-149P-201ENST00000390870 SSUH2Q9Y2M2 353 aa9.84□□□□□ -0.83
RNU1-149P-201ENST00000390870 STAG3Q9UJ98 1225 aa9.81□□□□□ -0.84
RNU1-149P-201ENST00000390870 KLHL34Q8N239 644 aa9.8□□□□□ -0.84
RNU1-149P-201ENST00000390870 TOP2AP11388 1531 aaKnown RBP9.8□□□□□ -0.84
RNU1-149P-201ENST00000390870 NESP48681 1621 aa9.76□□□□□ -0.85
RNU1-149P-201ENST00000390870 PLCD3Q8N3E9 789 aa9.76□□□□□ -0.85
RNU1-149P-201ENST00000390870 ERCC6Q03468 1493 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms