Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC7.84□□□□□ -1.15
LHX6Q9UPM6 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LHX6Q9UPM6 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
LHX6Q9UPM6 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LHX6Q9UPM6 FAM222B-201ENST00000341217 4033 ntTSL 5 BASIC7.84□□□□□ -1.15
LHX6Q9UPM6 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
LHX6Q9UPM6 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LHX6Q9UPM6 LINC00486-201ENST00000414054 1794 ntTSL 4 BASIC7.84□□□□□ -1.15
LHX6Q9UPM6 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC7.84□□□□□ -1.15
LHX6Q9UPM6 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LHX6Q9UPM6 NUTM1-203ENST00000537011 4102 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.16
LHX6Q9UPM6 LINC00608-202ENST00000432733 2818 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
LHX6Q9UPM6 LINC00943-203ENST00000535544 2815 ntTSL 2 BASIC7.84□□□□□ -1.16
LHX6Q9UPM6 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AC002480.4-201ENST00000414116 2592 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AL583836.1-201ENST00000464755 2395 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AL161912.4-201ENST00000623889 2468 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 Y_RNA.274-201ENST00000364714 101 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 UBE2V1P2-201ENST00000397758 440 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 RNU2-14P-201ENST00000411053 191 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 RNA5SP498-201ENST00000411342 120 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 BX323014.1-201ENST00000412876 237 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AL358942.1-201ENST00000418595 1178 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 RBMY1KP-201ENST00000423480 476 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 ACTP1-201ENST00000440793 383 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AC020550.1-201ENST00000447385 163 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AL353752.1-201ENST00000454946 260 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 RN7SL201P-201ENST00000482306 296 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AP001025.2-201ENST00000490908 477 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AC008526.1-201ENST00000509149 338 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AC106774.2-201ENST00000510266 406 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 IGHVII-26-2-201ENST00000518751 325 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 HIGD1AP6-201ENST00000521833 279 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AC068446.3-201ENST00000555285 382 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 MIR548Y-201ENST00000582739 110 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AL355365.1-201ENST00000616480 294 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 RAD54L-201ENST00000371975 3108 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 MEF2C-239ENST00000636294 2576 ntTSL 5 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 HDAC1P2-201ENST00000453661 1398 ntBASIC7.83□□□□□ -1.16
LHX6Q9UPM6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LHX6Q9UPM6 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 LRRC37A11P-201ENST00000425901 3580 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 CLEC1A-201ENST00000315330 2685 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 AC138409.1-201ENST00000505001 3598 ntBASIC7.82□□□□□ -1.16
LHX6Q9UPM6 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 CLEC4M-204ENST00000359059 1733 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 SNORD14.1-201ENST00000365609 90 ntBASIC7.82□□□□□ -1.16
LHX6Q9UPM6 RNU6-657P-201ENST00000383904 107 ntBASIC7.82□□□□□ -1.16
LHX6Q9UPM6 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 RNA5SP256-201ENST00000390978 113 ntBASIC7.82□□□□□ -1.16
LHX6Q9UPM6 NUPR1-202ENST00000395641 550 ntTSL 2 BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 RNA5SP198-201ENST00000410376 127 ntBASIC7.82□□□□□ -1.16
LHX6Q9UPM6 RNU6-1050P-201ENST00000410388 107 ntBASIC7.82□□□□□ -1.16
LHX6Q9UPM6 RAC1P3-201ENST00000416129 580 ntBASIC7.82□□□□□ -1.16
LHX6Q9UPM6 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC7.82□□□□□ -1.16
LHX6Q9UPM6 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms