Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AC117409.1-201ENST00000470499 1310 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 CDY19P-201ENST00000411668 1613 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 CDY18P-201ENST00000438294 1609 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 OR52B1P-201ENST00000316506 909 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 SNORA51.12-201ENST00000384448 134 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 PTP4A1P1-201ENST00000420539 515 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 MTCO2P5-201ENST00000422621 426 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 GTF2IP20-201ENST00000431663 360 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 RPL7P11-201ENST00000437586 658 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 RPL7P12-201ENST00000446719 750 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AC023194.2-201ENST00000465398 406 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 SCARNA20.1-201ENST00000516009 138 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AP003122.3-201ENST00000526316 255 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 KCTD9P4-201ENST00000526766 1166 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AP000889.1-201ENST00000530968 660 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AP003034.1-201ENST00000534621 422 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 NELL2-211ENST00000548826 559 ntTSL 2 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AC090948.1-201ENST00000607464 549 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AC097381.3-201ENST00000608962 462 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 RNA5SP440-201ENST00000612665 119 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AC009268.2-201ENST00000621925 457 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AC139792.3-201ENST00000623525 224 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AL354702.2-202ENST00000641481 890 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 RLIMP2-201ENST00000427891 1563 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 STXBP5L-206ENST00000492541 3114 ntTSL 5 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 SAMMSON-222ENST00000641901 2727 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 AC000036.1-201ENST00000449652 2030 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 WNK1-220ENST00000574564 1401 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 MAPK10-316ENST00000641430 2285 ntBASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 GANC-206ENST00000566442 2512 ntTSL 2 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 NLRP9P1-201ENST00000540920 2655 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 RNA5SP27-201ENST00000363839 119 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 Y_RNA.259-201ENST00000364619 101 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 RNU6-702P-201ENST00000364982 107 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 Y_RNA.445-201ENST00000384168 102 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 UBBP1-201ENST00000392399 473 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AL096800.1-201ENST00000405326 893 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms