Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 NAP1L4P1-201ENST00000319092 1157 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 RN7SKP81-201ENST00000365603 331 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 RPL23AP39-201ENST00000415533 405 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 ELOCP14-201ENST00000428070 331 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 ELOCP7-201ENST00000439968 331 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 OR7E125P-201ENST00000443450 846 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 AC023194.2-201ENST00000465398 406 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 RN7SL643P-201ENST00000471845 291 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 IGBP1P4-201ENST00000503202 879 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 AC018710.1-201ENST00000506509 158 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 OR5M14P-201ENST00000506803 618 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 AC008521.2-201ENST00000591021 259 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 AP004372.1-201ENST00000604842 844 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 AC129915.3-201ENST00000634128 948 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 AC132825.8-201ENST00000640783 297 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 SAMMSON-227ENST00000642114 1199 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC8.29□□□□□ -1.08
RC3H1Q5TC82 AL355974.1-201ENST00000618896 1708 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.29□□□□□ -1.08
RC3H1Q5TC82 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AL359396.1-201ENST00000623151 2376 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 RNU4-79P-201ENST00000362764 141 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 Y_RNA.142-201ENST00000363491 102 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 RPS3P2-201ENST00000421346 701 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 RPL12P16-201ENST00000431098 498 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AL450263.2-201ENST00000439400 589 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 BUD31P2-201ENST00000449374 300 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 FAR2P1-206ENST00000449736 709 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AL136981.1-203ENST00000451452 3844 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms