RNA–Protein interactions for RNA: ENST00000282260.10

HOMER1-201, Transcript of homer scaffold protein 1, humanhuman

TSL 1 (best) BASIC

Gene HOMER1, Length 774 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-201ENST00000282260 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
HOMER1-201ENST00000282260 CHIC1Q5VXU3 224 aa21.82■■□□□ 1.08
HOMER1-201ENST00000282260 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
HOMER1-201ENST00000282260 PHF23Q9BUL5 403 aaPredicted RBP19.68■□□□□ 0.74
HOMER1-201ENST00000282260 FOXD1Q16676 465 aa18.75■□□□□ 0.59
HOMER1-201ENST00000282260 POTEDQ86YR6 584 aa18.2■□□□□ 0.5
HOMER1-201ENST00000282260 MSH5O43196 834 aa17.69■□□□□ 0.42
HOMER1-201ENST00000282260 PIAS4Q8N2W9 510 aaPredicted RBP17.39■□□□□ 0.37
HOMER1-201ENST00000282260 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
HOMER1-201ENST00000282260 PPP6R1Q9UPN7 881 aa17.14■□□□□ 0.33
HOMER1-201ENST00000282260 ADRA2BP18089 450 aa17.05■□□□□ 0.32
HOMER1-201ENST00000282260 MAPK8IP2Q13387 824 aaPredicted RBP15.82■□□□□ 0.12
HOMER1-201ENST00000282260 DMRT2Q9Y5R5 561 aa15.79■□□□□ 0.12
HOMER1-201ENST00000282260 SCAF1Q9H7N4 1312 aaKnown RBP15.51■□□□□ 0.07
HOMER1-201ENST00000282260 CACNB1Q02641 598 aaPredicted RBP15.51■□□□□ 0.07
HOMER1-201ENST00000282260 DCAF8L1A6NGE4 600 aa15.18■□□□□ 0.02
HOMER1-201ENST00000282260 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
HOMER1-201ENST00000282260 RNF39Q9H2S5 420 aa15.08■□□□□ 0
HOMER1-201ENST00000282260 KCNA4P22459 653 aa15.04■□□□□ -0
HOMER1-201ENST00000282260 HOXD11P31277 338 aaPredicted RBP15□□□□□ -0.01
HOMER1-201ENST00000282260 CNKSR2Q8WXI2 1034 aa14.84□□□□□ -0.03
HOMER1-201ENST00000282260 C1QBPQ07021 282 aaKnown RBP14.79□□□□□ -0.04
HOMER1-201ENST00000282260 RNF216Q9NWF9 866 aaPredicted RBP14.74□□□□□ -0.05
HOMER1-201ENST00000282260 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
HOMER1-201ENST00000282260 EHMT2Q96KQ7 1210 aa14.54□□□□□ -0.08
HOMER1-201ENST00000282260 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
HOMER1-201ENST00000282260 NPM3O75607 178 aaKnown RBP14.35□□□□□ -0.11
HOMER1-201ENST00000282260 SLC4A1APQ9BWU0 796 aaKnown RBP14.33□□□□□ -0.12
HOMER1-201ENST00000282260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.29□□□□□ -0.121e-6■■□□□ 11.7
HOMER1-201ENST00000282260 POTEHQ6S545 545 aa14.15□□□□□ -0.14
HOMER1-201ENST00000282260 CSRNP3Q8WYN3 585 aa14.15□□□□□ -0.14
HOMER1-201ENST00000282260 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
HOMER1-201ENST00000282260 DSG3P32926 999 aa13.95□□□□□ -0.18
HOMER1-201ENST00000282260 SPINK5Q9NQ38 1064 aaPredicted RBP13.94□□□□□ -0.18
HOMER1-201ENST00000282260 ZBTB22O15209 634 aa13.91□□□□□ -0.18
HOMER1-201ENST00000282260 CAPN15O75808 1086 aa13.9□□□□□ -0.18
HOMER1-201ENST00000282260 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
HOMER1-201ENST00000282260 FOXD4L1Q9NU39 408 aa13.61□□□□□ -0.23
HOMER1-201ENST00000282260 ABCB7O75027 752 aa13.57□□□□□ -0.24
HOMER1-201ENST00000282260 TRHP20396 242 aaPredicted RBP13.56□□□□□ -0.24
HOMER1-201ENST00000282260 ZNF219Q9P2Y4 722 aaPredicted RBP13.49□□□□□ -0.25
HOMER1-201ENST00000282260 APLP2Q06481 763 aa13.48□□□□□ -0.25
HOMER1-201ENST00000282260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
HOMER1-201ENST00000282260 HNRNPUL2Q1KMD3 747 aaKnown RBP13.44□□□□□ -0.26
HOMER1-201ENST00000282260 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
HOMER1-201ENST00000282260 RBM42Q9BTD8 480 aaKnown RBP13.28□□□□□ -0.28
HOMER1-201ENST00000282260 MYCNP04198 464 aaPredicted RBP13.26□□□□□ -0.29
HOMER1-201ENST00000282260 CHRDL2Q6WN34 429 aa13.23□□□□□ -0.29
HOMER1-201ENST00000282260 POLA2Q14181 598 aa13.06□□□□□ -0.32
HOMER1-201ENST00000282260 ATXN8OSP0DMR3 200 aa13.03□□□□□ -0.32
HOMER1-201ENST00000282260 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
HOMER1-201ENST00000282260 ATF5Q9Y2D1 282 aaPredicted RBP12.94□□□□□ -0.34
HOMER1-201ENST00000282260 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
HOMER1-201ENST00000282260 PIP4P2Q8N4L2 257 aa12.82□□□□□ -0.36
HOMER1-201ENST00000282260 ZBTB12Q9Y330 459 aaPredicted RBP12.79□□□□□ -0.36
HOMER1-201ENST00000282260 REM2Q8IYK8 340 aaPredicted RBP12.78□□□□□ -0.36
HOMER1-201ENST00000282260 FKBP8Q14318 412 aa12.73□□□□□ -0.37
HOMER1-201ENST00000282260 OSCARQ8IYS5 282 aa12.72□□□□□ -0.37
HOMER1-201ENST00000282260 HAX1O00165 279 aa12.7□□□□□ -0.38
HOMER1-201ENST00000282260 PITPNM1O00562 1244 aa12.68□□□□□ -0.38
HOMER1-201ENST00000282260 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
HOMER1-201ENST00000282260 EVX2Q03828 476 aa12.56□□□□□ -0.4
HOMER1-201ENST00000282260 RTN4Q9NQC3 1192 aaKnown RBP12.47□□□□□ -0.41
HOMER1-201ENST00000282260 FBLN2P98095 1184 aa12.46□□□□□ -0.41
HOMER1-201ENST00000282260 SPDYE2BA6NHP3 402 aa12.38□□□□□ -0.43
HOMER1-201ENST00000282260 SPDYE6P0CI01 402 aa12.38□□□□□ -0.43
HOMER1-201ENST00000282260 SPDYE2Q495Y8 402 aa12.38□□□□□ -0.43
HOMER1-201ENST00000282260 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
HOMER1-201ENST00000282260 AMER1Q5JTC6 1135 aaPredicted RBP12.34□□□□□ -0.43
HOMER1-201ENST00000282260 PRKAR2AP13861 404 aaKnown RBP12.33□□□□□ -0.44
HOMER1-201ENST00000282260 C19orf67A6NJJ6 358 aa12.26□□□□□ -0.45
HOMER1-201ENST00000282260 CLEC11AQ9Y240 323 aa12.25□□□□□ -0.45
HOMER1-201ENST00000282260 SPDYE4A6NLX3 237 aa12.22□□□□□ -0.45
HOMER1-201ENST00000282260 GABBR2O75899 941 aa12.21□□□□□ -0.45
HOMER1-201ENST00000282260 SPDYE1Q8NFV5 336 aaPredicted RBP12.21□□□□□ -0.45
HOMER1-201ENST00000282260 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.45
HOMER1-201ENST00000282260 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.45
HOMER1-201ENST00000282260 LHX8Q68G74 356 aa12.19□□□□□ -0.46
HOMER1-201ENST00000282260 CHADLQ6NUI6 762 aa12.11□□□□□ -0.47
HOMER1-201ENST00000282260 PROM2Q8N271 834 aa12.11□□□□□ -0.47
HOMER1-201ENST00000282260 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
HOMER1-201ENST00000282260 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
HOMER1-201ENST00000282260 POTEIP0CG38 1075 aa11.98□□□□□ -0.49
HOMER1-201ENST00000282260 SLC24A1O60721 1099 aa11.95□□□□□ -0.5
HOMER1-201ENST00000282260 PRR29P0C7W0 189 aa11.95□□□□□ -0.5
HOMER1-201ENST00000282260 VASPP50552 380 aaPredicted RBP11.94□□□□□ -0.5
HOMER1-201ENST00000282260 CD44P16070 742 aaKnown RBP11.91□□□□□ -0.5
HOMER1-201ENST00000282260 IFNLR1Q8IU57 520 aaPredicted RBP11.87□□□□□ -0.51
HOMER1-201ENST00000282260 PLSCR2Q9NRY7 297 aa11.86□□□□□ -0.51
HOMER1-201ENST00000282260 FARP1Q9Y4F1 1045 aaPredicted RBP11.83□□□□□ -0.52
HOMER1-201ENST00000282260 CLCN6P51797 869 aa11.75□□□□□ -0.53
HOMER1-201ENST00000282260 DCBLD2Q96PD2 775 aa11.75□□□□□ -0.53
HOMER1-201ENST00000282260 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
HOMER1-201ENST00000282260 ZNF579Q8NAF0 562 aaKnown RBP11.69□□□□□ -0.54
HOMER1-201ENST00000282260 PKD2Q13563 968 aa11.66□□□□□ -0.54
HOMER1-201ENST00000282260 ZRANB1Q9UGI0 708 aa11.64□□□□□ -0.55
HOMER1-201ENST00000282260 CREBZFQ9NS37 354 aa11.63□□□□□ -0.55
HOMER1-201ENST00000282260 OTUD5Q96G74 571 aa11.62□□□□□ -0.55
HOMER1-201ENST00000282260 GALR2O43603 387 aaPredicted RBP11.61□□□□□ -0.55
HOMER1-201ENST00000282260 KLHL34Q8N239 644 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms