Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HLA-DMAP28067 CASC19-274ENST00000642018 970 ntBASIC4.38□□□□□ -1.71
HLA-DMAP28067 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DMAP28067 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DMAP28067 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HLA-DMAP28067 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DMAP28067 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DMAP28067 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DMAP28067 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DMAP28067 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DMAP28067 AL359922.3-201ENST00000624779 1670 ntBASIC4.38□□□□□ -1.71
HLA-DMAP28067 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DMAP28067 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DMAP28067 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DMAP28067 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DMAP28067 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DMAP28067 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 AC008549.2-201ENST00000333482 706 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DMAP28067 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DMAP28067 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 NCSTNP1-201ENST00000406229 144 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 EIF4A1P3-201ENST00000411521 244 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 AC098592.2-201ENST00000413158 265 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 AC019185.1-201ENST00000442718 389 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 GAPDHP25-201ENST00000447061 1001 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 OTX2P1-201ENST00000450956 354 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 AC091180.1-201ENST00000462104 372 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 AC078878.1-201ENST00000539832 958 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 DYNLL1P4-201ENST00000549314 266 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DMAP28067 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DMAP28067 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 AC008814.1-201ENST00000603797 406 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 MIR6774-201ENST00000614651 70 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 AC234782.5-201ENST00000617723 324 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 AC118658.2-201ENST00000618697 459 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 AC009704.2-201ENST00000618739 483 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 AP001052.1-201ENST00000626421 99 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 IRF5P1-201ENST00000504852 2164 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DMAP28067 AC090971.4-201ENST00000560291 1800 ntBASIC4.37□□□□□ -1.71
HLA-DMAP28067 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HLA-DMAP28067 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DMAP28067 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DMAP28067 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DMAP28067 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DMAP28067 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DMAP28067 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 MIR105-1-201ENST00000385222 81 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AL133388.1-201ENST00000404509 287 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 OR4K12P-201ENST00000406538 961 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AL662874.1-201ENST00000426065 230 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 PPIAP13-201ENST00000434706 478 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 RAB9AP5-201ENST00000437794 597 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 RAB9AP2-201ENST00000443911 597 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 AC099063.2-201ENST00000446360 662 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 AC105399.1-202ENST00000447303 205 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 AP006222.1-205ENST00000450734 457 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 LRRC37A14P-201ENST00000452297 462 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 RN7SL41P-201ENST00000476144 297 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 AC109481.1-201ENST00000509173 282 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 OR51K1P-201ENST00000510214 950 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms