RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 NISCHQ9Y2I1 1504 aa8.87□□□□□ -0.99
LRIT3-202ENST00000594814 SLC24A1O60721 1099 aa8.5□□□□□ -1.05
LRIT3-202ENST00000594814 APLP2Q06481 763 aa8.05□□□□□ -1.12
LRIT3-202ENST00000594814 DAXXQ9UER7 740 aaPredicted RBP7.94□□□□□ -1.14
LRIT3-202ENST00000594814 PRKCSHP14314 528 aaPredicted RBP7.82□□□□□ -1.16
LRIT3-202ENST00000594814 CCDC180Q9P1Z9 1646 aa7.75□□□□□ -1.17
LRIT3-202ENST00000594814 NCBP3Q53F19 620 aaKnown RBP7.72□□□□□ -1.17
LRIT3-202ENST00000594814 PELP1Q8IZL8 1130 aaKnown RBP7.72□□□□□ -1.17
LRIT3-202ENST00000594814 MYT1Q01538 1121 aa7.67□□□□□ -1.18
LRIT3-202ENST00000594814 TTBK1Q5TCY1 1321 aaPredicted RBP7.62□□□□□ -1.19
LRIT3-202ENST00000594814 PLPPR3Q6T4P5 718 aa7.56□□□□□ -1.2
LRIT3-202ENST00000594814 SHROOM4Q9ULL8 1493 aa7.5□□□□□ -1.21
LRIT3-202ENST00000594814 RTN4Q9NQC3 1192 aaKnown RBP7.46□□□□□ -1.21
LRIT3-202ENST00000594814 ABCC9O60706 1549 aa7.46□□□□□ -1.22
LRIT3-202ENST00000594814 DCAF8L2P0C7V8 631 aa7.45□□□□□ -1.22
LRIT3-202ENST00000594814 ZCCHC6Q5VYS8 1495 aaKnown RBP7.44□□□□□ -1.22
LRIT3-202ENST00000594814 ARXQ96QS3 562 aa7.4□□□□□ -1.22
LRIT3-202ENST00000594814 MYO15BQ96JP2 1530 aa7.35□□□□□ -1.23
LRIT3-202ENST00000594814 CHIC1Q5VXU3 224 aa7.3□□□□□ -1.24
LRIT3-202ENST00000594814 TIMELESSQ9UNS1 1208 aa7.29□□□□□ -1.24
LRIT3-202ENST00000594814 KCNA4P22459 653 aa7.22□□□□□ -1.25
LRIT3-202ENST00000594814 DCAF1Q9Y4B6 1507 aa7.22□□□□□ -1.25
LRIT3-202ENST00000594814 UNC13AQ9UPW8 1703 aa7.21□□□□□ -1.25
LRIT3-202ENST00000594814 HRCP23327 699 aa7.21□□□□□ -1.26
LRIT3-202ENST00000594814 AMER1Q5JTC6 1135 aaPredicted RBP7.2□□□□□ -1.26
LRIT3-202ENST00000594814 SCRIBQ14160 1630 aa7.17□□□□□ -1.26
LRIT3-202ENST00000594814 CSRNP3Q8WYN3 585 aa7.15□□□□□ -1.27
LRIT3-202ENST00000594814 NACADO15069 1562 aa7.14□□□□□ -1.27
LRIT3-202ENST00000594814 RB1CC1Q8TDY2 1594 aa7.14□□□□□ -1.27
LRIT3-202ENST00000594814 ERICH6Q7L0X2 663 aa7.11□□□□□ -1.27
LRIT3-202ENST00000594814 PABPN1Q86U42 306 aaKnown RBP eCLIP7.11□□□□□ -1.27
LRIT3-202ENST00000594814 KLHL34Q8N239 644 aa7.09□□□□□ -1.27
LRIT3-202ENST00000594814 BICRAQ9NZM4 1560 aa7.05□□□□□ -1.28
LRIT3-202ENST00000594814 EHMT2Q96KQ7 1210 aa7.04□□□□□ -1.28
LRIT3-202ENST00000594814 CECR2Q9BXF3 1484 aa7.04□□□□□ -1.28
LRIT3-202ENST00000594814 SUPT5HO00267 1087 aaKnown RBP7.03□□□□□ -1.28
LRIT3-202ENST00000594814 DNAJC5Q9H3Z4 198 aa7.03□□□□□ -1.28
LRIT3-202ENST00000594814 CUX2O14529 1486 aa7.01□□□□□ -1.29
LRIT3-202ENST00000594814 TAOK2Q9UL54 1235 aa6.99□□□□□ -1.29
LRIT3-202ENST00000594814 ZEB1P37275 1124 aaPredicted RBP6.99□□□□□ -1.29
LRIT3-202ENST00000594814 MROH2BQ7Z745 1585 aa6.94□□□□□ -1.3
LRIT3-202ENST00000594814 PLEKHG5O94827 1062 aa6.94□□□□□ -1.3
LRIT3-202ENST00000594814 RSF1Q96T23 1441 aaPredicted RBP6.93□□□□□ -1.3
LRIT3-202ENST00000594814 AEBP2Q6ZN18 517 aaPredicted RBP6.92□□□□□ -1.3
LRIT3-202ENST00000594814 DNAJC5BQ9UF47 199 aa6.92□□□□□ -1.3
LRIT3-202ENST00000594814 WIZO95785 1651 aa6.87□□□□□ -1.31
LRIT3-202ENST00000594814 PHF23Q9BUL5 403 aaPredicted RBP6.86□□□□□ -1.31
LRIT3-202ENST00000594814 HOMEZQ8IX15 550 aa6.85□□□□□ -1.31
LRIT3-202ENST00000594814 EIF5BO60841 1220 aaKnown RBP6.83□□□□□ -1.32
LRIT3-202ENST00000594814 FAM9AQ8IZU1 332 aaPredicted RBP6.83□□□□□ -1.32
LRIT3-202ENST00000594814 TULP1O00294 542 aaPredicted RBP6.83□□□□□ -1.32
LRIT3-202ENST00000594814 LOC105371045A0A1W2PR82 267 aa6.82□□□□□ -1.32
LRIT3-202ENST00000594814 SMARCA4P51532 1647 aa6.81□□□□□ -1.32
LRIT3-202ENST00000594814 CC2D2AQ9P2K1 1620 aa6.79□□□□□ -1.32
LRIT3-202ENST00000594814 BAZ1AQ9NRL2 1556 aaPredicted RBP6.77□□□□□ -1.33
LRIT3-202ENST00000594814 BCL11AQ9H165 835 aa6.77□□□□□ -1.33
LRIT3-202ENST00000594814 CLSPNQ9HAW4 1339 aa6.77□□□□□ -1.33
LRIT3-202ENST00000594814 EIF4G1Q04637 1599 aaKnown RBP6.77□□□□□ -1.33
LRIT3-202ENST00000594814 PPP6R1Q9UPN7 881 aa6.75□□□□□ -1.33
LRIT3-202ENST00000594814 SCAF1Q9H7N4 1312 aaKnown RBP6.75□□□□□ -1.33
LRIT3-202ENST00000594814 ATAD2BQ9ULI0 1458 aa6.75□□□□□ -1.33
LRIT3-202ENST00000594814 TMEM132AQ24JP5 1023 aa6.72□□□□□ -1.33
LRIT3-202ENST00000594814 CENPBP07199 599 aaPredicted RBP6.72□□□□□ -1.33
LRIT3-202ENST00000594814 TRIM26Q12899 539 aaPredicted RBP6.72□□□□□ -1.33
LRIT3-202ENST00000594814 GTF3C3Q9Y5Q9 886 aa6.72□□□□□ -1.33
LRIT3-202ENST00000594814 CCDC88BA6NC98 1476 aa6.71□□□□□ -1.33
LRIT3-202ENST00000594814 PLCB2Q00722 1185 aa6.7□□□□□ -1.34
LRIT3-202ENST00000594814 THOC2Q8NI27 1593 aaKnown RBP6.7□□□□□ -1.34
LRIT3-202ENST00000594814 PEG3Q9GZU2 1588 aa6.7□□□□□ -1.34
LRIT3-202ENST00000594814 ACIN1Q9UKV3 1341 aaKnown RBP6.69□□□□□ -1.34
LRIT3-202ENST00000594814 SMARCA2P51531 1590 aa6.68□□□□□ -1.34
LRIT3-202ENST00000594814 TOP2AP11388 1531 aaKnown RBP6.68□□□□□ -1.34
LRIT3-202ENST00000594814 UBE2Q2Q8WVN8 375 aa6.66□□□□□ -1.34
LRIT3-202ENST00000594814 BCANQ96GW7 911 aa6.66□□□□□ -1.34
LRIT3-202ENST00000594814 FBXO3Q9UK99 471 aa6.65□□□□□ -1.34
LRIT3-202ENST00000594814 NCAPD3P42695 1498 aa6.65□□□□□ -1.34
LRIT3-202ENST00000594814 PCGF6Q9BYE7 350 aa6.65□□□□□ -1.35
LRIT3-202ENST00000594814 BAZ1BQ9UIG0 1483 aaKnown RBP6.65□□□□□ -1.35
LRIT3-202ENST00000594814 SAMD1Q6SPF0 538 aaPredicted RBP6.64□□□□□ -1.35
LRIT3-202ENST00000594814 ABCC8Q09428 1581 aa6.61□□□□□ -1.35
LRIT3-202ENST00000594814 POTEDQ86YR6 584 aa6.6□□□□□ -1.35
LRIT3-202ENST00000594814 NESP48681 1621 aa6.6□□□□□ -1.35
LRIT3-202ENST00000594814 PODXL2Q9NZ53 605 aa6.59□□□□□ -1.35
LRIT3-202ENST00000594814 ZBTB22O15209 634 aa6.59□□□□□ -1.35
LRIT3-202ENST00000594814 TPRNQ4KMQ1 711 aa6.59□□□□□ -1.35
LRIT3-202ENST00000594814 CNKSR2Q8WXI2 1034 aa6.58□□□□□ -1.36
LRIT3-202ENST00000594814 HMGXB3Q12766 1538 aa6.58□□□□□ -1.36
LRIT3-202ENST00000594814 PPARGC1BQ86YN6 1023 aaKnown RBP6.58□□□□□ -1.36
LRIT3-202ENST00000594814 KDM2AQ9Y2K7 1162 aa6.58□□□□□ -1.36
LRIT3-202ENST00000594814 NPM2Q86SE8 214 aaKnown RBP6.56□□□□□ -1.36
LRIT3-202ENST00000594814 MYT1LQ9UL68 1186 aa6.56□□□□□ -1.36
LRIT3-202ENST00000594814 RUSC2Q8N2Y8 1516 aa6.53□□□□□ -1.36
LRIT3-202ENST00000594814 CFTRP13569 1480 aa6.51□□□□□ -1.37
LRIT3-202ENST00000594814 TRIM41Q8WV44 630 aa6.51□□□□□ -1.37
LRIT3-202ENST00000594814 SYNJ1O43426 1573 aa6.5□□□□□ -1.37
LRIT3-202ENST00000594814 ANP32EQ9BTT0 268 aa6.5□□□□□ -1.37
LRIT3-202ENST00000594814 CADPSQ9ULU8 1353 aa6.49□□□□□ -1.37
LRIT3-202ENST00000594814 SOGA1O94964 1423 aa6.49□□□□□ -1.37
LRIT3-202ENST00000594814 VSIG10Q8N0Z9 540 aa6.48□□□□□ -1.37
LRIT3-202ENST00000594814 LAMC3Q9Y6N6 1575 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms