Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 OR7E62P-201ENST00000456741 477 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AC097493.1-201ENST00000463958 372 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 SNORA81.2-201ENST00000516868 170 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 COX6B1P4-201ENST00000519826 484 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AP006587.5-201ENST00000532033 739 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 PHBP2-201ENST00000532859 806 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 UBE2CP4-201ENST00000561405 535 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AL136139.1-201ENST00000605568 222 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AP001437.1-201ENST00000608783 456 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AC010205.1-201ENST00000616668 449 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PCDHB11Q9Y5F2 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.21□□□□□ -1.25
PCDHB11Q9Y5F2 CASC19-221ENST00000641309 1382 ntBASIC7.21□□□□□ -1.25
PCDHB11Q9Y5F2 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
PCDHB11Q9Y5F2 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
PCDHB11Q9Y5F2 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
PCDHB11Q9Y5F2 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
PCDHB11Q9Y5F2 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PCDHB11Q9Y5F2 SOCS5P5-201ENST00000402732 1586 ntBASIC7.21□□□□□ -1.25
PCDHB11Q9Y5F2 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
PCDHB11Q9Y5F2 AC011008.2-201ENST00000624866 3352 ntBASIC7.21□□□□□ -1.25
PCDHB11Q9Y5F2 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PCDHB11Q9Y5F2 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
PCDHB11Q9Y5F2 PARP4P1-201ENST00000435945 2337 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 HCG18-244ENST00000602516 2890 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 GNG5P1-201ENST00000255500 204 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 Y_RNA.157-201ENST00000363638 102 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 SNORA68-201ENST00000384437 133 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 RNU6-738P-201ENST00000384531 106 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 MRPL32P1-201ENST00000406301 247 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 RAB28P1-201ENST00000411517 641 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 OR9R1P-201ENST00000412200 877 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 RAD23BP1-201ENST00000421404 1227 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 RIMKLBP2-201ENST00000424737 654 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 RPS27AP6-201ENST00000427962 448 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 RPL31P35-201ENST00000431058 377 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AL365400.1-201ENST00000431854 640 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 Z83313.1-201ENST00000433780 718 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AL592114.2-201ENST00000440142 532 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 RPL23AP16-201ENST00000441715 421 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 HMGN1P36-201ENST00000446623 298 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 RPS27AP15-201ENST00000447672 466 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 TRGVB-201ENST00000453257 471 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AC015820.1-201ENST00000473882 321 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 RNU6-150P-201ENST00000516237 95 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 Y_RNA.672-201ENST00000516289 104 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 OR8A2P-201ENST00000528631 952 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AP001180.3-201ENST00000582221 145 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 SIGLEC31P-201ENST00000594237 551 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 CKS1BP3-201ENST00000600888 237 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AC007687.1-201ENST00000602704 304 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AL390058.1-201ENST00000603834 629 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AC243830.2-201ENST00000618067 630 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AC007347.2-201ENST00000623044 180 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AP006248.2-201ENST00000623309 592 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 SAMMSON-222ENST00000641901 2727 ntBASIC7.21□□□□□ -1.26
PCDHB11Q9Y5F2 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 MTND4P27-201ENST00000450813 1354 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms