Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LRTM1Q9HBL6 AL691482.1-201ENST00000453255 87 ntBASIC4.84□□□□□ -1.63
LRTM1Q9HBL6 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.84□□□□□ -1.63
LRTM1Q9HBL6 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.84□□□□□ -1.63
LRTM1Q9HBL6 RNA5SP92-201ENST00000516437 110 ntBASIC4.84□□□□□ -1.63
LRTM1Q9HBL6 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LRTM1Q9HBL6 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.84□□□□□ -1.63
LRTM1Q9HBL6 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.84□□□□□ -1.63
LRTM1Q9HBL6 FKBP1AP1-201ENST00000594588 318 ntBASIC4.84□□□□□ -1.63
LRTM1Q9HBL6 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.84□□□□□ -1.63
LRTM1Q9HBL6 AC024940.4-201ENST00000605507 246 ntBASIC4.84□□□□□ -1.63
LRTM1Q9HBL6 AL512329.2-201ENST00000607350 548 ntBASIC4.84□□□□□ -1.63
LRTM1Q9HBL6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRTM1Q9HBL6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
LRTM1Q9HBL6 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LRTM1Q9HBL6 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.84□□□□□ -1.64
LRTM1Q9HBL6 AC093849.1-201ENST00000563631 2209 ntBASIC4.84□□□□□ -1.64
LRTM1Q9HBL6 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 PANDAR-201ENST00000629595 1506 ntBASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 LRRC37BP1-201ENST00000398851 714 ntBASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 SNORA77-201ENST00000408716 125 ntBASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 RN7SKP114-201ENST00000410327 279 ntBASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 NPM1P40-201ENST00000412758 733 ntBASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 RPL35AP24-201ENST00000413846 330 ntBASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 AL450023.3-201ENST00000440592 271 ntBASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 HMGB1P4-201ENST00000455362 567 ntBASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 AC009127.1-201ENST00000467090 155 ntBASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 AC093763.2-201ENST00000505334 1223 ntBASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 PGAM1P13-201ENST00000507497 754 ntBASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 RNA5SP303-201ENST00000516192 130 ntBASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 AC073342.3-201ENST00000624211 193 ntBASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRTM1Q9HBL6 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 PABPC1P6-201ENST00000445594 1829 ntBASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 U3.2-201ENST00000362981 210 ntBASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 RNU1-43P-201ENST00000365052 165 ntBASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 GNG5P5-201ENST00000420444 220 ntBASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 RPS29P9-201ENST00000440360 171 ntBASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 RPS4XP1-201ENST00000482189 787 ntBASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 RNA5SP249-201ENST00000516127 99 ntBASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 AC012339.2-201ENST00000523996 453 ntBASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 HNRNPRP2-201ENST00000528421 743 ntBASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 AC005868.1-201ENST00000536421 331 ntBASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRTM1Q9HBL6 AL049830.4-201ENST00000555149 351 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms