Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
DDX49Q9Y6V7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
DDX49Q9Y6V7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
DDX49Q9Y6V7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
DDX49Q9Y6V7 AC116050.2-201ENST00000612102 1779 ntBASIC23.4■■□□□ 1.34
DDX49Q9Y6V7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
DDX49Q9Y6V7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.39■■□□□ 1.34
DDX49Q9Y6V7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.39■■□□□ 1.34
DDX49Q9Y6V7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
DDX49Q9Y6V7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
DDX49Q9Y6V7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
DDX49Q9Y6V7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.34
DDX49Q9Y6V7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
DDX49Q9Y6V7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
DDX49Q9Y6V7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
DDX49Q9Y6V7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
DDX49Q9Y6V7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.39■■□□□ 1.33
DDX49Q9Y6V7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.39■■□□□ 1.33
DDX49Q9Y6V7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
DDX49Q9Y6V7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.39■■□□□ 1.33
DDX49Q9Y6V7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.39■■□□□ 1.33
DDX49Q9Y6V7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.39■■□□□ 1.33
DDX49Q9Y6V7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 AL691432.2-201ENST00000607222 2038 ntBASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX49Q9Y6V7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 SOX15-203ENST00000570788 1093 ntBASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 TMEM179-206ENST00000616017 1645 ntBASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX49Q9Y6V7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 UNC93B4-201ENST00000505679 747 ntBASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 AC105020.6-201ENST00000621523 1217 ntBASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC23.36■■□□□ 1.33
DDX49Q9Y6V7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms