Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
YIPF1Q9Y548 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
YIPF1Q9Y548 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
YIPF1Q9Y548 AC009237.14-201ENST00000609975 1594 ntBASIC20.44■□□□□ 0.86
YIPF1Q9Y548 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
YIPF1Q9Y548 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.44■□□□□ 0.86
YIPF1Q9Y548 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
YIPF1Q9Y548 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
YIPF1Q9Y548 INGX-201ENST00000359239 846 ntBASIC20.44■□□□□ 0.86
YIPF1Q9Y548 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.44■□□□□ 0.86
YIPF1Q9Y548 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.44■□□□□ 0.86
YIPF1Q9Y548 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.44■□□□□ 0.86
YIPF1Q9Y548 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.44■□□□□ 0.86
YIPF1Q9Y548 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
YIPF1Q9Y548 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.44■□□□□ 0.86
YIPF1Q9Y548 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
YIPF1Q9Y548 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
YIPF1Q9Y548 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
YIPF1Q9Y548 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 KRT18P35-201ENST00000510488 1269 ntBASIC20.43■□□□□ 0.86
YIPF1Q9Y548 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 AL160286.2-201ENST00000567150 934 ntBASIC20.43■□□□□ 0.86
YIPF1Q9Y548 FAM87A-204ENST00000613235 858 ntBASIC20.43■□□□□ 0.86
YIPF1Q9Y548 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 LINC01465-201ENST00000408887 1940 ntBASIC20.43■□□□□ 0.86
YIPF1Q9Y548 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.43■□□□□ 0.86
YIPF1Q9Y548 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.42■□□□□ 0.86
YIPF1Q9Y548 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
YIPF1Q9Y548 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
YIPF1Q9Y548 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
YIPF1Q9Y548 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.42■□□□□ 0.86
YIPF1Q9Y548 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
YIPF1Q9Y548 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.42■□□□□ 0.86
YIPF1Q9Y548 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
YIPF1Q9Y548 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.42■□□□□ 0.86
YIPF1Q9Y548 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.42■□□□□ 0.86
YIPF1Q9Y548 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
YIPF1Q9Y548 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
YIPF1Q9Y548 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
YIPF1Q9Y548 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.41■□□□□ 0.86
YIPF1Q9Y548 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 AC128688.1-201ENST00000487626 519 ntBASIC20.41■□□□□ 0.86
YIPF1Q9Y548 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 AL590326.2-201ENST00000625139 305 ntBASIC20.41■□□□□ 0.86
YIPF1Q9Y548 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
YIPF1Q9Y548 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
YIPF1Q9Y548 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
YIPF1Q9Y548 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
YIPF1Q9Y548 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
YIPF1Q9Y548 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
YIPF1Q9Y548 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.4■□□□□ 0.86
YIPF1Q9Y548 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
YIPF1Q9Y548 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.4■□□□□ 0.86
YIPF1Q9Y548 AC092667.1-201ENST00000434301 2586 ntBASIC20.4■□□□□ 0.86
YIPF1Q9Y548 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
YIPF1Q9Y548 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.4■□□□□ 0.86
YIPF1Q9Y548 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.4■□□□□ 0.86
YIPF1Q9Y548 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms